BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036259
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   179   2e-43
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]    169   2e-40
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]    169   3e-40
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g...   167   8e-40
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi...   167   8e-40

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/132 (65%), Positives = 104/132 (78%)
 Frame = +1

Query: 91  DEQLSTAEMDFRMKXXXXXXXXQKLHKQFVLSGVLSESEFWVTRKELLSTEASKALKQRV 270
           DEQLST EM+ R+K        QKLHKQFVLSGVL+E+EFW TRK+LL    S+  KQRV
Sbjct: 120 DEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRV 179

Query: 271 GFKSAMITDINPVLDGRSNKVTFNLTPEIIDQIFAEKPAVHKAYLKFVPYKFSEVEFWRK 450
           GFKSAMI+D+ P+ DGR+N+VTFNLTPEII QIFAEKPAVH+A+L FVP K +E +FW K
Sbjct: 180 GFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNK 239

Query: 451 YCRAKYLYRESN 486
           YCRA+YL+   N
Sbjct: 240 YCRAEYLHCTRN 251


>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  169 bits (428), Expect = 2e-40
 Identities = 89/163 (54%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
 Frame = +1

Query: 4   EFISKFLTNKLQSKKSCRKDPKPISEIFSD--EQLSTAEMDFRMKXXXXXXXXQKLHKQF 177
           +F+++ L  K Q     R +  P     S   EQLS+AEM+ RMK        QKLHK+F
Sbjct: 91  DFVARVL-GKYQGTVPARPNVPPELSAVSTGPEQLSSAEMERRMKLLREDSELQKLHKKF 149

Query: 178 VLSGVLSESEFWVTRKELLSTEASKALKQRVGFKSAMITDINPVLDGRSNKVTFNLTPEI 357
           VL  +L ESEFW TRK LL  E SK  KQ+ GFKSAM+ D+ P  DG++NKVTF+LT EI
Sbjct: 150 VLGNILQESEFWATRKNLLDDETSKGSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEI 209

Query: 358 IDQIFAEKPAVHKAYLKFVPYKFSEVEFWRKYCRAKYLYRESN 486
           I QIFAEKPAVH+A+L +VP K SE +FW KYCRA+YL R  N
Sbjct: 210 IHQIFAEKPAVHRAFLDYVPKKLSEKDFWTKYCRAEYLLRTKN 252


>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/141 (58%), Positives = 102/141 (72%)
 Frame = +1

Query: 64  PKPISEIFSDEQLSTAEMDFRMKXXXXXXXXQKLHKQFVLSGVLSESEFWVTRKELLSTE 243
           P+ ++     EQLS+AEM+ RMK        QKLHK+FVL  +L ESEFW TRK LL  E
Sbjct: 116 PEKLAVSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDE 175

Query: 244 ASKALKQRVGFKSAMITDINPVLDGRSNKVTFNLTPEIIDQIFAEKPAVHKAYLKFVPYK 423
            +K+ KQ+ GFKSAM+ D+ P  DG++NKVTF+LT EII QIFAEKPAVH+A+L +VP K
Sbjct: 176 TNKSSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKK 235

Query: 424 FSEVEFWRKYCRAKYLYRESN 486
            SE +FW KYCRA+YL R  N
Sbjct: 236 LSEKDFWTKYCRAEYLLRTKN 256


>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
           gi|38636938|dbj|BAD03200.1| unknown protein [Oryza
           sativa Japonica Group] gi|113623552|dbj|BAF23497.1|
           Os08g0338200 [Oryza sativa Japonica Group]
           gi|215686948|dbj|BAG90767.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 604

 Score =  167 bits (423), Expect = 8e-40
 Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
 Frame = +1

Query: 4   EFISKFLTNKLQSKKSCRKDPKPISEIFS--DEQLSTAEMDFRMKXXXXXXXXQKLHKQF 177
           +F++K L  K Q     + +  P + + S  +EQLS AEM  RMK        QKLH +F
Sbjct: 95  DFVAKVL-GKQQGTIPPKPNVPPENSVTSTGEEQLSAAEMQRRMKLLQEDSELQKLHMKF 153

Query: 178 VLSGVLSESEFWVTRKELLSTEASKALKQRVGFKSAMITDINPVLDGRSNKVTFNLTPEI 357
           VL  +L ESEFW TRK LL  EA+K  KQR GFKSAM+ D+ P  DGR+NKVTF+LT EI
Sbjct: 154 VLGNILQESEFWATRKNLLEDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEI 213

Query: 358 IDQIFAEKPAVHKAYLKFVPYKFSEVEFWRKYCRAKYLYRESN 486
           I QIFAEKPAVH+A+L FVP K SE +FW KY RA+YL R  N
Sbjct: 214 IHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFRAEYLLRTKN 256


>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
           gi|222640385|gb|EEE68517.1| hypothetical protein
           OsJ_26954 [Oryza sativa Japonica Group]
          Length = 625

 Score =  167 bits (423), Expect = 8e-40
 Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
 Frame = +1

Query: 4   EFISKFLTNKLQSKKSCRKDPKPISEIFS--DEQLSTAEMDFRMKXXXXXXXXQKLHKQF 177
           +F++K L  K Q     + +  P + + S  +EQLS AEM  RMK        QKLH +F
Sbjct: 95  DFVAKVL-GKQQGTIPPKPNVPPENSVTSTGEEQLSAAEMQRRMKLLQEDSELQKLHMKF 153

Query: 178 VLSGVLSESEFWVTRKELLSTEASKALKQRVGFKSAMITDINPVLDGRSNKVTFNLTPEI 357
           VL  +L ESEFW TRK LL  EA+K  KQR GFKSAM+ D+ P  DGR+NKVTF+LT EI
Sbjct: 154 VLGNILQESEFWATRKNLLEDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEI 213

Query: 358 IDQIFAEKPAVHKAYLKFVPYKFSEVEFWRKYCRAKYLYRESN 486
           I QIFAEKPAVH+A+L FVP K SE +FW KY RA+YL R  N
Sbjct: 214 IHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFRAEYLLRTKN 256