BLASTX nr result

ID: Coptis24_contig00036235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036235
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...    71   1e-10
emb|CBI39701.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...    70   1e-10
ref|XP_002888830.1| hypothetical protein ARALYDRAFT_894982 [Arab...    70   1e-10
emb|CBI26749.3| unnamed protein product [Vitis vinifera]               70   1e-10

>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +3

Query: 153  GVAGLAVTYGLSLNDLQARVVEYFGHLEGLMISVERILQYTRIPSEPPLVIE 308
            G+AGLA+TYGL+LN +QARV+    ++E  +ISVERILQYT IPSEPPLV E
Sbjct: 1173 GIAGLAMTYGLNLNMIQARVIWNLCNMENKIISVERILQYTSIPSEPPLVTE 1224


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +3

Query: 153  GVAGLAVTYGLSLNDLQARVVEYFGHLEGLMISVERILQYTRIPSEPPLVIE 308
            G+AGLA+TYGL+LN +QARV+    ++E  +ISVERILQYT IPSEPPLV E
Sbjct: 1040 GIAGLAMTYGLNLNMIQARVIWNLCNMENKIISVERILQYTSIPSEPPLVTE 1091


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = +3

Query: 153  GVAGLAVTYGLSLNDLQARVVEYFGHLEGLMISVERILQYTRIPSEPPLVIE 308
            G+AGLAVTYGL+LN LQA VV    ++E  +ISVER+LQYT IPSEPPLV+E
Sbjct: 1177 GIAGLAVTYGLNLNTLQAWVVWNLCNMENKIISVERMLQYTSIPSEPPLVME 1228


>ref|XP_002888830.1| hypothetical protein ARALYDRAFT_894982 [Arabidopsis lyrata subsp.
           lyrata] gi|297334671|gb|EFH65089.1| hypothetical protein
           ARALYDRAFT_894982 [Arabidopsis lyrata subsp. lyrata]
          Length = 1017

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +3

Query: 156 VAGLAVTYGLSLNDLQARVVEYFGHLEGLMISVERILQYTRIPSEPPLVIEA 311
           +AGLAVTYGLSLN LQA ++  F +LE  +ISVERILQY  +P+EPPLVIE+
Sbjct: 729 LAGLAVTYGLSLNTLQAWLIWSFSNLENKIISVERILQYASVPNEPPLVIES 780


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = +3

Query: 153  GVAGLAVTYGLSLNDLQARVVEYFGHLEGLMISVERILQYTRIPSEPPLVIE 308
            G+AGLAVTYGL+LN LQA VV    ++E  +ISVER+LQYT IPSEPPLV+E
Sbjct: 961  GIAGLAVTYGLNLNTLQAWVVWNLCNMENKIISVERMLQYTSIPSEPPLVME 1012


Top