BLASTX nr result

ID: Coptis24_contig00036057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036057
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516703.1| PREDICTED: uncharacterized protein LOC100775...   121   8e-26
ref|XP_002529729.1| conserved hypothetical protein [Ricinus comm...   120   1e-25
ref|XP_002509798.1| conserved hypothetical protein [Ricinus comm...   119   2e-25
ref|XP_002303587.1| predicted protein [Populus trichocarpa] gi|2...   114   7e-24
gb|AFK42135.1| unknown [Medicago truncatula]                          114   1e-23

>ref|XP_003516703.1| PREDICTED: uncharacterized protein LOC100775737 [Glycine max]
          Length = 282

 Score =  121 bits (303), Expect = 8e-26
 Identities = 61/106 (57%), Positives = 74/106 (69%)
 Frame = +3

Query: 222 KSVLRMQHLQNISVWAAGEVGMPSYAAFLGNCFGKYSEASSIPIDSSFIPCQRCEAILQP 401
           KS LR +HL+N++VWA     +PS  AF G+ F  + EA+ IP D S I CQRCE ILQP
Sbjct: 37  KSKLRFEHLKNLAVWATT---IPSLGAFYGHQFATFGEATGIPPDPSLITCQRCETILQP 93

Query: 402 GFNCTVRIETNGAKVRKRRNKSHIPTKNIVVYTCHFCSNRNVKRGT 539
           GFN TVRIE N +KVR R  KS   T+N VVY CHFC ++N+KRGT
Sbjct: 94  GFNSTVRIEKNKSKVRHRHKKSCNITQNKVVYKCHFCLHQNLKRGT 139


>ref|XP_002529729.1| conserved hypothetical protein [Ricinus communis]
           gi|223530793|gb|EEF32658.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 290

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/105 (53%), Positives = 72/105 (68%)
 Frame = +3

Query: 222 KSVLRMQHLQNISVWAAGEVGMPSYAAFLGNCFGKYSEASSIPIDSSFIPCQRCEAILQP 401
           KS L+++HLQN+SVWA+ E  +PS +AF G  F    EA  +  D + IPCQRCE +LQP
Sbjct: 42  KSFLKLEHLQNLSVWASREASIPSLSAFFGRQFAAAGEALGLLPDHALIPCQRCETLLQP 101

Query: 402 GFNCTVRIETNGAKVRKRRNKSHIPTKNIVVYTCHFCSNRNVKRG 536
           G NCTVRI    AK R+R  K +   ++ VVY CHFCS+RN+KRG
Sbjct: 102 GLNCTVRIVKTLAKSRRRHKKPNTSMQSNVVYNCHFCSHRNLKRG 146


>ref|XP_002509798.1| conserved hypothetical protein [Ricinus communis]
           gi|223549697|gb|EEF51185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/106 (50%), Positives = 70/106 (66%)
 Frame = +3

Query: 222 KSVLRMQHLQNISVWAAGEVGMPSYAAFLGNCFGKYSEASSIPIDSSFIPCQRCEAILQP 401
           KS L+++HLQN+S+W A E  +PS +AF G       EA   P D +  PCQRCE +LQP
Sbjct: 42  KSFLKLEHLQNLSLWTAREASIPSLSAFFGRQLAAAGEALGFPSDPALFPCQRCETLLQP 101

Query: 402 GFNCTVRIETNGAKVRKRRNKSHIPTKNIVVYTCHFCSNRNVKRGT 539
           G NCTVRI    AK R+R  K +   +N VVY CHFCS++N+KRG+
Sbjct: 102 GLNCTVRIAKTLAKSRRRHKKPNTSMQNNVVYNCHFCSHQNLKRGS 147


>ref|XP_002303587.1| predicted protein [Populus trichocarpa] gi|222841019|gb|EEE78566.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  114 bits (286), Expect = 7e-24
 Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +3

Query: 222 KSVLRMQHLQNISVWAAGEVGMPSYAAFLGNCFGKYSEASSIPID-SSFIPCQRCEAILQ 398
           +S+LR++HLQN++ WA  E  +PS AAF G  F   +EA  +P+D S+   CQRC   L+
Sbjct: 37  RSLLRLEHLQNLASWATEEASIPSLAAFFGRQFASSAEALGVPLDPSALFQCQRCGTFLR 96

Query: 399 PGFNCTVRIETNGAKVRKRRNKSHIPTKNIVVYTCHFCSNRNVKRGT 539
           PGFNCT +IE N +K R+R  +    TKN VVY CH C + N+KRGT
Sbjct: 97  PGFNCTTQIEKNQSKARRRHKRFSTSTKNNVVYKCHHCLHINLKRGT 143


>gb|AFK42135.1| unknown [Medicago truncatula]
          Length = 160

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/106 (52%), Positives = 72/106 (67%)
 Frame = +3

Query: 222 KSVLRMQHLQNISVWAAGEVGMPSYAAFLGNCFGKYSEASSIPIDSSFIPCQRCEAILQP 401
           KS LR+ HL+N+++WA  +  +PS +AF G      SEAS +  D S I CQRCE +L P
Sbjct: 40  KSHLRIDHLKNLALWATTDPNIPSLSAFYGRQLAAVSEASGVAPDPSLITCQRCETVLHP 99

Query: 402 GFNCTVRIETNGAKVRKRRNKSHIPTKNIVVYTCHFCSNRNVKRGT 539
           GFN TVRIE N +K R+R  K    ++N VVY CHFCS+RN+KRGT
Sbjct: 100 GFNSTVRIEKNRSK-RRRNKKFGSISQNNVVYNCHFCSHRNLKRGT 144


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