BLASTX nr result

ID: Coptis24_contig00035492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035492
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-lik...   277   7e-73
emb|CBI21866.3| unnamed protein product [Vitis vinifera]              277   7e-73
emb|CAN77628.1| hypothetical protein VITISV_029424 [Vitis vinifera]   277   7e-73
emb|CAC80990.1| dihydroorotase [Beta vulgaris]                        275   4e-72
ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, put...   271   4e-71

>ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-like [Vitis vinifera]
          Length = 377

 Score =  277 bits (708), Expect = 7e-73
 Identities = 128/153 (83%), Positives = 142/153 (92%)
 Frame = -3

Query: 520 VAATVTPQHLLLNRNSLFQGGLQPHNFCLPVLKREIHRKALISAVTSGSNQYFLGTDSAP 341
           VAATVTPQHL+LNRNSLFQGGLQPHN+CLPVLKRE HR+A++SAVTSGS ++FLGTDSAP
Sbjct: 223 VAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGSRKFFLGTDSAP 282

Query: 340 HERQRKECSCGCAGMYNAPVALSVYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNESKIK 161
           HER+RKEC CGCAG+YNAPVALS+YAKVFEEAGALDKLEAFTSFNGPDFYGLPRN SKIK
Sbjct: 283 HERRRKECPCGCAGIYNAPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNTSKIK 342

Query: 160 LVKAPWKIPESYTYPSGTIVPMLAGETVDWYPS 62
           L K PWK+PESY++  G IVPM AGET+DW PS
Sbjct: 343 LSKTPWKVPESYSFSFGDIVPMFAGETLDWLPS 375


>emb|CBI21866.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  277 bits (708), Expect = 7e-73
 Identities = 128/153 (83%), Positives = 142/153 (92%)
 Frame = -3

Query: 520 VAATVTPQHLLLNRNSLFQGGLQPHNFCLPVLKREIHRKALISAVTSGSNQYFLGTDSAP 341
           VAATVTPQHL+LNRNSLFQGGLQPHN+CLPVLKRE HR+A++SAVTSGS ++FLGTDSAP
Sbjct: 192 VAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGSRKFFLGTDSAP 251

Query: 340 HERQRKECSCGCAGMYNAPVALSVYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNESKIK 161
           HER+RKEC CGCAG+YNAPVALS+YAKVFEEAGALDKLEAFTSFNGPDFYGLPRN SKIK
Sbjct: 252 HERRRKECPCGCAGIYNAPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNTSKIK 311

Query: 160 LVKAPWKIPESYTYPSGTIVPMLAGETVDWYPS 62
           L K PWK+PESY++  G IVPM AGET+DW PS
Sbjct: 312 LSKTPWKVPESYSFSFGDIVPMFAGETLDWLPS 344


>emb|CAN77628.1| hypothetical protein VITISV_029424 [Vitis vinifera]
          Length = 221

 Score =  277 bits (708), Expect = 7e-73
 Identities = 128/153 (83%), Positives = 142/153 (92%)
 Frame = -3

Query: 520 VAATVTPQHLLLNRNSLFQGGLQPHNFCLPVLKREIHRKALISAVTSGSNQYFLGTDSAP 341
           VAATVTPQHL+LNRNSLFQGGLQPHN+CLPVLKRE HR+A++SAVTSGS ++FLGTDSAP
Sbjct: 67  VAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGSRKFFLGTDSAP 126

Query: 340 HERQRKECSCGCAGMYNAPVALSVYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNESKIK 161
           HER+RKEC CGCAG+YNAPVALS+YAKVFEEAGALDKLEAFTSFNGPDFYGLPRN SKIK
Sbjct: 127 HERRRKECPCGCAGIYNAPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNTSKIK 186

Query: 160 LVKAPWKIPESYTYPSGTIVPMLAGETVDWYPS 62
           L K PWK+PESY++  G IVPM AGET+DW PS
Sbjct: 187 LSKTPWKVPESYSFSFGDIVPMFAGETLDWLPS 219


>emb|CAC80990.1| dihydroorotase [Beta vulgaris]
          Length = 345

 Score =  275 bits (702), Expect = 4e-72
 Identities = 128/153 (83%), Positives = 141/153 (92%)
 Frame = -3

Query: 520 VAATVTPQHLLLNRNSLFQGGLQPHNFCLPVLKREIHRKALISAVTSGSNQYFLGTDSAP 341
           VAATVTPQHL+LNRNSLFQGGLQPHN+CLPVLKREIHR+AL+SAVTSGS QYFLGTDSAP
Sbjct: 192 VAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKREIHRQALVSAVTSGSKQYFLGTDSAP 251

Query: 340 HERQRKECSCGCAGMYNAPVALSVYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNESKIK 161
           HER+RKECSCGCAG+YN+PVALS+YAKVFEEAGALDKLEAFTSFNGPDFYGLPRN SKIK
Sbjct: 252 HERRRKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNTSKIK 311

Query: 160 LVKAPWKIPESYTYPSGTIVPMLAGETVDWYPS 62
           L K PWK+ E   +PSG I+PM AG+ +DW PS
Sbjct: 312 LKKEPWKVLERIPFPSGEIIPMFAGQMLDWKPS 344


>ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, putative [Ricinus
           communis] gi|223542880|gb|EEF44416.1| Dihydroorotase,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 398

 Score =  271 bits (693), Expect = 4e-71
 Identities = 122/153 (79%), Positives = 143/153 (93%)
 Frame = -3

Query: 520 VAATVTPQHLLLNRNSLFQGGLQPHNFCLPVLKREIHRKALISAVTSGSNQYFLGTDSAP 341
           VAATVTPQHL+LNRN++FQGGLQPHN+CLPVLKRE HR+A++SAVTSGS ++FLGTDSAP
Sbjct: 244 VAATVTPQHLVLNRNAIFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGSKRFFLGTDSAP 303

Query: 340 HERQRKECSCGCAGMYNAPVALSVYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNESKIK 161
           HER+RKECSCGCAG+YNAPVALS+YAK+FEEAGALDKLEAFTSFNGPDFYGLPRN SKIK
Sbjct: 304 HERKRKECSCGCAGIYNAPVALSLYAKIFEEAGALDKLEAFTSFNGPDFYGLPRNASKIK 363

Query: 160 LVKAPWKIPESYTYPSGTIVPMLAGETVDWYPS 62
           L K  WK+PE++++P G I+PM AGET++W PS
Sbjct: 364 LAKNQWKVPEAFSFPFGDIIPMSAGETLEWQPS 396


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