BLASTX nr result

ID: Coptis24_contig00035483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035483
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]    47   2e-07
emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]    41   6e-07
emb|CAN68902.1| hypothetical protein VITISV_031323 [Vitis vinifera]    39   8e-07
emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]    39   8e-07
ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249...    39   2e-06

>emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]
          Length = 1241

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 21/50 (42%), Positives = 29/50 (58%)
 Frame = +3

Query: 372 GTELENMCSLCKEEEKSVDQILLNRDFLKDF*VLFFSSFHKPWRMPTNIR 521
           G  + N CSLCKE E+S D IL++    ++F  L  SSF   W  P ++R
Sbjct: 636 GWSMVNRCSLCKENEESADHILIHCGXTREFWTLLLSSFGVXWVFPASVR 685



 Score = 33.1 bits (74), Expect(2) = 2e-07
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +1

Query: 166 DNKEEFSVQSVYQRLTKEYAFCKCYK*RI*FLIFP*KRIWMDCIPSKVAFFCWPAFMVRI 345
           + + +F+V+S Y+ L  E +            +FP K +W    P +  FF W A   +I
Sbjct: 578 ERRGKFNVKSYYKSLKDENS-----------PLFPAKEVWCSYAPFRTHFFAWEAVWGKI 626

Query: 346 QTINI 360
            T+++
Sbjct: 627 STVDM 631


>emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]
          Length = 1701

 Score = 41.2 bits (95), Expect(2) = 6e-07
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +3

Query: 372  GTELENMCSLCKEEEKSVDQILLNRDFLKDF*VLFFSSFHKPWRMPTNIRE 524
            G  + N C LC EEE+S+D IL++    +D   L F+ F   W +P++ RE
Sbjct: 1570 GWAVANRCFLCCEEEESIDHILIHCSKARDLWDLLFALFGVCWVLPSSARE 1620



 Score = 37.0 bits (84), Expect(2) = 6e-07
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = +1

Query: 181  FSVQSVYQRLTKEYAFCKCYK*RI*FLIFP*KRIWMDCIPSKVAFFCWPAFMVRIQTINI 360
            FSV+S+Y  L+   A            +FP   IW   +PSKV FF W A   ++ T++ 
Sbjct: 1517 FSVRSLYNDLSSRRAG-----------LFPHGLIWNPSVPSKVCFFAWEASWGKVLTMDQ 1565

Query: 361  FNVR 372
            F  R
Sbjct: 1566 FKKR 1569


>emb|CAN68902.1| hypothetical protein VITISV_031323 [Vitis vinifera]
          Length = 1206

 Score = 39.3 bits (90), Expect(2) = 8e-07
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +1

Query: 181 FSVQSVYQRLTKEYAFCKCYK*RI*FLIFP*KRIWMDCIPSKVAFFCWPAFMVRIQTINI 360
           FSV+S+Y  L                + FP   IW  C+P+KV FF W AF  ++ T++ 
Sbjct: 423 FSVKSLYSILDSRKG-----------VQFPINIIWNPCVPTKVCFFAWEAFWGKVLTLDQ 471

Query: 361 FNVRVRNL 384
              R R L
Sbjct: 472 LKKRGRCL 479



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 360 LQCTGTELENMCSLCKEEEKSVDQILLNRDFLKDF*VLFFSSFHKPWRMPTNIRE 524
           L+  G  L N C LC EEE+S+D IL+     +    L F+ F   W +P ++R+
Sbjct: 472 LKKRGRCLANRCFLCCEEEESIDHILIQCSKARMLWELLFALFGVTWVLPYSVRD 526


>emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]
          Length = 939

 Score = 39.3 bits (90), Expect(2) = 8e-07
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +1

Query: 181 FSVQSVYQRLTKEYAFCKCYK*RI*FLIFP*KRIWMDCIPSKVAFFCWPAFMVRIQTINI 360
           FSV+S+Y  L                + FP   IW  C+P+KV FF W AF  ++ T++ 
Sbjct: 755 FSVKSLYSILDSRSG-----------VQFPINIIWNPCVPTKVGFFAWEAFWGKVLTLDQ 803

Query: 361 FNVRVRNL 384
              R R L
Sbjct: 804 LKKRGRCL 811



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 360 LQCTGTELENMCSLCKEEEKSVDQILLNRDFLKDF*VLFFSSFHKPWRMPTNIRE 524
           L+  G  L N C LC EEE+S+D IL+     +    L F+ F   W +P ++R+
Sbjct: 804 LKKRGRCLANRCFLCCEEEESIDHILIQCSKARVLWELLFALFGVSWVLPYSVRD 858


>ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera]
          Length = 2143

 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 360  LQCTGTELENMCSLCKEEEKSVDQILLNRDFLKDF*VLFFSSFHKPWRMPTNIRE 524
            L+  G  L N C LC EEE+S+D IL+     +    L F+ F   W +P ++R+
Sbjct: 1825 LKKRGRCLANRCFLCCEEEESIDHILIQCSKARVLWELLFALFGVSWVLPYSVRD 1879



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +1

Query: 265  FP*KRIWMDCIPSKVAFFCWPAFMVRIQTINIFNVRVRNL 384
            FP   IW  C+P+KV FF W AF  ++ T++    R R L
Sbjct: 1793 FPINIIWNPCVPTKVCFFAWEAFGGKVLTLDQLKKRGRCL 1832


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