BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035476
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]   189   3e-46
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                 188   3e-46
emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]   187   6e-46
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ...   187   8e-46
emb|CAA73042.1| polyprotein [Ananas comosus]                          186   2e-45

>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/146 (62%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2    PTRGGKLVVFTDASGTGLGCVLMQDHKVVSYASRQLKIHERRYHTHDLELAAVVFALKVW 181
            P  G    ++ DAS  GLGCVLMQ  KVV+YASRQLK HER Y THDLELA VVFALK W
Sbjct: 756  PISGELFTIYCDASTVGLGCVLMQQDKVVAYASRQLKQHERNYPTHDLELAVVVFALKTW 815

Query: 182  RHYLYGEKFELYTDHKSLKYLYSQKELNMRQQRWMEFISSYDFEIQYHPGKDNVVADALS 361
            RHYLYGEKFE+Y+DHKSLKY+++QK+LN RQ+RWME +  YDF + YHPGK NVVADALS
Sbjct: 816  RHYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALS 875

Query: 362  RLP-GVLTTLMVQEWKSLETISAYDV 436
            R   G L++L ++E++    I  +++
Sbjct: 876  RKSVGQLSSLELREFEMHTVIEDFEL 901


>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score =  188 bits (478), Expect = 3e-46
 Identities = 87/121 (71%), Positives = 101/121 (83%)
 Frame = +2

Query: 2   PTRGGKLVVFTDASGTGLGCVLMQDHKVVSYASRQLKIHERRYHTHDLELAAVVFALKVW 181
           P   G  V+++DAS  GLGCVLMQ  KVV+YASRQLK HE+ Y THDLELAAVVFALK+W
Sbjct: 283 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 342

Query: 182 RHYLYGEKFELYTDHKSLKYLYSQKELNMRQQRWMEFISSYDFEIQYHPGKDNVVADALS 361
           RHYLYGEK +++TDHKSLKY ++QKELNMRQ+RW+E +  YD EI YHPGK NVVADALS
Sbjct: 343 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 402

Query: 362 R 364
           R
Sbjct: 403 R 403


>emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]
          Length = 893

 Score =  187 bits (476), Expect = 6e-46
 Identities = 91/146 (62%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   PTRGGKLVVFTDASGTGLGCVLMQDHKVVSYASRQLKIHERRYHTHDLELAAVVFALKVW 181
           P  G    ++ D S  GLGCVLMQ  KVV+YASRQLK HER Y THDLELAAVVFALK W
Sbjct: 283 PISGELFTIYCDVSTVGLGCVLMQQGKVVAYASRQLKQHERNYLTHDLELAAVVFALKTW 342

Query: 182 RHYLYGEKFELYTDHKSLKYLYSQKELNMRQQRWMEFISSYDFEIQYHPGKDNVVADALS 361
           RHYLYGEKFE+Y+DHKSLKY+++QK+LN RQ+RWME +  YDF + YHPGK NVVADALS
Sbjct: 343 RHYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALS 402

Query: 362 RL-PGVLTTLMVQEWKSLETISAYDV 436
           R   G L++L ++E++    I  +++
Sbjct: 403 RKNVGQLSSLELREFEMHAVIEDFEL 428


>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 482

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/131 (67%), Positives = 109/131 (83%)
 Frame = +2

Query: 23  VVFTDASGTGLGCVLMQDHKVVSYASRQLKIHERRYHTHDLELAAVVFALKVWRHYLYGE 202
           VV+ DAS  GLG VLMQD KVV+YASRQL+I+E+ Y THDLELAAVVF LK+WRHYLYG 
Sbjct: 66  VVYCDASKLGLGGVLMQDGKVVAYASRQLRIYEKNYPTHDLELAAVVFVLKIWRHYLYGS 125

Query: 203 KFELYTDHKSLKYLYSQKELNMRQQRWMEFISSYDFEIQYHPGKDNVVADALSRLPGVLT 382
           +FE+++DHKSLKYL+ QKELNMRQ+RW+E +  YDF + YHPGK NVVADALSR    ++
Sbjct: 126 RFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPGKANVVADALSRKTLHMS 185

Query: 383 TLMVQEWKSLE 415
            LMV+E++ LE
Sbjct: 186 ALMVREFELLE 196


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  186 bits (472), Expect = 2e-45
 Identities = 87/121 (71%), Positives = 102/121 (84%)
 Frame = +2

Query: 2   PTRGGKLVVFTDASGTGLGCVLMQDHKVVSYASRQLKIHERRYHTHDLELAAVVFALKVW 181
           P  G   VV++DAS  GLGCVLMQD KV++YASRQLK +E+ Y THDLELAAVVFALK+W
Sbjct: 307 PVAGAGYVVYSDASLNGLGCVLMQDDKVIAYASRQLKEYEKNYPTHDLELAAVVFALKLW 366

Query: 182 RHYLYGEKFELYTDHKSLKYLYSQKELNMRQQRWMEFISSYDFEIQYHPGKDNVVADALS 361
           RHYLYGE+ E+YTDHKSLKYL++QKELN+RQ+RW+E +  YD  I YHPGK NVVADALS
Sbjct: 367 RHYLYGERCEVYTDHKSLKYLFTQKELNLRQRRWLELLKDYDLTILYHPGKANVVADALS 426

Query: 362 R 364
           R
Sbjct: 427 R 427