BLASTX nr result

ID: Coptis24_contig00035475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035475
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535763.1| PREDICTED: uncharacterized protein LOC100805...   114   6e-24
ref|XP_003592704.1| Lysine-specific demethylase 3B [Medicago tru...   112   3e-23
ref|XP_002307161.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   112   4e-23
ref|XP_003592703.1| Lysine-specific demethylase 3B [Medicago tru...   112   4e-23

>ref|XP_003535763.1| PREDICTED: uncharacterized protein LOC100805723 [Glycine max]
          Length = 1222

 Score =  114 bits (286), Expect = 6e-24
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = +2

Query: 2   CHQCQRNDKGKVVRCMECGSKRYCFPCIEKWYPQMSHEEIAESCPVCRGNCNCKACLRKN 181
           CHQCQRNDKG+VVRC  C  KR+C  CIE WYP +  + IAE+CPVCRGNCNCKACLR N
Sbjct: 452 CHQCQRNDKGRVVRCTSCKRKRFCVHCIENWYPHLKEDYIAEACPVCRGNCNCKACLRSN 511

Query: 182 EISKEKYNSA 211
           E+ K+    A
Sbjct: 512 ELIKKMKKKA 521


>ref|XP_003592704.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|358345318|ref|XP_003636728.1| Lysine-specific
           demethylase 3B [Medicago truncatula]
           gi|355481752|gb|AES62955.1| Lysine-specific demethylase
           3B [Medicago truncatula] gi|355502663|gb|AES83866.1|
           Lysine-specific demethylase 3B [Medicago truncatula]
          Length = 1153

 Score =  112 bits (280), Expect = 3e-23
 Identities = 46/69 (66%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
 Frame = +2

Query: 2   CHQCQRNDKGKVVRCMECGSKRYCFPCIEKWYPQMSHEEIAESCPVCRGNCNCKACLRK- 178
           CHQCQRNDKG+VVRC +C  KRYC PC+  WYP +  E+IAE+CPVC GNCNCKACLR  
Sbjct: 343 CHQCQRNDKGRVVRCTKCKRKRYCIPCLNNWYPHLKEEKIAEACPVCCGNCNCKACLRSS 402

Query: 179 ---NEISKE 196
              NEI K+
Sbjct: 403 VLINEIKKK 411


>ref|XP_002307161.1| predicted protein [Populus trichocarpa] gi|222856610|gb|EEE94157.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  112 bits (280), Expect = 3e-23
 Identities = 42/58 (72%), Positives = 51/58 (87%)
 Frame = +2

Query: 2   CHQCQRNDKGKVVRCMECGSKRYCFPCIEKWYPQMSHEEIAESCPVCRGNCNCKACLR 175
           CHQCQRNDKG+VVRC++C  KRYC PC+ KWYP+M+ +EIA +CPVC GNCNCK+CLR
Sbjct: 2   CHQCQRNDKGRVVRCLKCKRKRYCIPCLTKWYPKMTEDEIANACPVCLGNCNCKSCLR 59


>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  112 bits (279), Expect = 4e-23
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = +2

Query: 2   CHQCQRNDKGKVVRCMECGSKRYCFPCIEKWYPQMSHEEIAESCPVCRGNCNCKACLR 175
           CHQCQRNDKG+VVRC +C  KR+C PC+E WYP MS E IAESCP C GNCNCKACLR
Sbjct: 488 CHQCQRNDKGRVVRCRKCKRKRFCIPCLETWYPHMSEEAIAESCPFCSGNCNCKACLR 545


>ref|XP_003592703.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|358345316|ref|XP_003636727.1| Lysine-specific
           demethylase 3B [Medicago truncatula]
           gi|355481751|gb|AES62954.1| Lysine-specific demethylase
           3B [Medicago truncatula] gi|355502662|gb|AES83865.1|
           Lysine-specific demethylase 3B [Medicago truncatula]
          Length = 1158

 Score =  112 bits (279), Expect = 4e-23
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = +2

Query: 2   CHQCQRNDKGKVVRCMECGSKRYCFPCIEKWYPQMSHEEIAESCPVCRGNCNCKACLRKN 181
           CHQCQRNDKG+VVRC +C  KR+C PC+  WYP +  EE+AE+CPVC GNCNCKACLR  
Sbjct: 327 CHQCQRNDKGRVVRCTKCKRKRFCIPCLNNWYPHLKEEEVAEACPVCCGNCNCKACLRSC 386

Query: 182 EISKE 196
            + KE
Sbjct: 387 ALIKE 391


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