BLASTX nr result
ID: Coptis24_contig00035464
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00035464
(392 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28363.3| unnamed protein product [Vitis vinifera] 144 1e-32
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28
emb|CBI34382.3| unnamed protein product [Vitis vinifera] 90 2e-16
emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera] 90 2e-16
gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays] 88 6e-16
>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 144 bits (362), Expect = 1e-32
Identities = 73/124 (58%), Positives = 93/124 (75%)
Frame = +1
Query: 16 IHARTKSTILFFNLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETL 195
IHART+ FNLY ++Y + G M EA+ LFDEMPER+L+SWTI+MSGY RHG A E L
Sbjct: 47 IHARTR----LFNLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVL 102
Query: 196 GVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENAL 375
+F +M+ G L+PDSFV+A+VLRAC +V+ LSYGR +H V+K VVD++VENAL
Sbjct: 103 MMFWDMLCGSGGGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENAL 162
Query: 376 VSMY 387
VSMY
Sbjct: 163 VSMY 166
Score = 72.4 bits (176), Expect = 4e-11
Identities = 34/113 (30%), Positives = 67/113 (59%)
Frame = +1
Query: 52 NLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNMVECHGN 231
N +Y S G + +A +F + + L+ W+ ++SGY ++G +E L +F +MV +
Sbjct: 160 NALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMV----S 215
Query: 232 VSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENALVSMYA 390
++PD+F +++VL AC+ ++ +G + HC ++K+ Y+EN+L+ YA
Sbjct: 216 GGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYA 268
Score = 63.2 bits (152), Expect = 2e-08
Identities = 37/118 (31%), Positives = 62/118 (52%)
Frame = +1
Query: 34 STILFFNLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNM 213
S + N YA G + + +F M E+ L+SW ++GY + H E L +FQ +
Sbjct: 255 SCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQIL 314
Query: 214 VECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENALVSMY 387
+E VS Q D F +L+A S + +L +G+E+H +L+ + YV ++L+ MY
Sbjct: 315 ME---EVS-QCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMY 368
>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 906
Score = 129 bits (325), Expect = 2e-28
Identities = 64/107 (59%), Positives = 82/107 (76%)
Frame = +1
Query: 67 IYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNMVECHGNVSLQP 246
+Y + G M EA+ LFDEMPER+L+SWTI+MSGY RHG A E L +F +M+ G L+P
Sbjct: 1 MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60
Query: 247 DSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENALVSMY 387
DSFV+A+VLRAC +V+ LSYGR +H V+K VVD++VENALVSMY
Sbjct: 61 DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMY 107
Score = 72.4 bits (176), Expect = 4e-11
Identities = 34/113 (30%), Positives = 67/113 (59%)
Frame = +1
Query: 52 NLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNMVECHGN 231
N +Y S G + +A +F + + L+ W+ ++SGY ++G +E L +F +MV +
Sbjct: 101 NALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMV----S 156
Query: 232 VSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENALVSMYA 390
++PD+F +++VL AC+ ++ +G + HC ++K+ Y+EN+L+ YA
Sbjct: 157 GGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYA 209
Score = 63.2 bits (152), Expect = 2e-08
Identities = 37/118 (31%), Positives = 62/118 (52%)
Frame = +1
Query: 34 STILFFNLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNM 213
S + N YA G + + +F M E+ L+SW ++GY + H E L +FQ +
Sbjct: 196 SCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQIL 255
Query: 214 VECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENALVSMY 387
+E VS Q D F +L+A S + +L +G+E+H +L+ + YV ++L+ MY
Sbjct: 256 ME---EVS-QCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMY 309
Score = 58.5 bits (140), Expect = 5e-07
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +1
Query: 31 KSTILFFNLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQN 210
KS + +Y+ G+ A+ +F + + W+ L+SG++ +G E L +F+
Sbjct: 371 KSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRK 430
Query: 211 MVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNY-VENALVSMY 387
M + G ++ + F + V+ AC ++NL G+ELHC++L+ G N+ V N L+++Y
Sbjct: 431 M-QFDG---IKANEFTFTSVILACLALENLRKGKELHCKILR-SGYESNFSVVNTLINLY 485
Query: 388 A 390
+
Sbjct: 486 S 486
>emb|CBI34382.3| unnamed protein product [Vitis vinifera]
Length = 705
Score = 90.1 bits (222), Expect = 2e-16
Identities = 39/118 (33%), Positives = 73/118 (61%)
Frame = +1
Query: 34 STILFFNLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNM 213
+ + N +YA G + +A LFD MP++T++SWT +MSG+ + G DE + +F M
Sbjct: 75 TNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM 134
Query: 214 VECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENALVSMY 387
+E +LQP+ + A++L+AC+ ++L + +HC ++K V+D +++N+L+ Y
Sbjct: 135 LE-----TLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGY 187
>emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 90.1 bits (222), Expect = 2e-16
Identities = 39/118 (33%), Positives = 73/118 (61%)
Frame = +1
Query: 34 STILFFNLYFQIYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNM 213
+ + N +YA G + +A LFD MP++T++SWT +MSG+ + G DE + +F M
Sbjct: 75 TNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM 134
Query: 214 VECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDNYVENALVSMY 387
+E +LQP+ + A++L+AC+ ++L + +HC ++K V+D +++N+L+ Y
Sbjct: 135 LE-----TLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGY 187
>gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]
Length = 798
Score = 88.2 bits (217), Expect = 6e-16
Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +1
Query: 70 YASVGLMHEAQTLFDEMPER--TLISWTILMSGYTRHGHADETLGVFQNMVECHGNVSLQ 243
+A G M A+ +FD MP+R +L++WT LMSGY HG A E L ++ C + ++
Sbjct: 57 HARAGRMQPAREVFDAMPDRGRSLVAWTTLMSGYATHGPASEAL----ELLLCMLGLLVR 112
Query: 244 PDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGV-VDNYVENALVSMYA 390
PD+FV+++ LRAC+ V +L GR+LH V K+ V VD +V N LV+MY+
Sbjct: 113 PDAFVFSVALRACAAVGSLRLGRQLHGAVAKLGYVGVDLFVANGLVTMYS 162
Score = 57.0 bits (136), Expect = 2e-06
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +1
Query: 67 IYASVGLMHEAQTLFDEMPERTLISWTILMSGYTRHGHADETLGVFQNMVECHGNVSLQP 246
+Y+S + A+ +F + L+SWT ++S YT +G E L +F M G V+
Sbjct: 160 MYSSCQSLPCAEKVFGSIASPDLVSWTSMLSAYTENGRDAEALVLFMEM--ARGGVAC-- 215
Query: 247 DSFVYAIVLRACSVVKN--LSYGRELHCRVLKIDGVVDNYVENALVSMY 387
D+F ++ LRA S + + + G +LHC ++K+ V +++N L+ Y
Sbjct: 216 DAFTLSVALRAASSLGHVGVGLGHQLHCCMIKMGLVGKEFLDNCLIGFY 264