BLASTX nr result
ID: Coptis24_contig00035452
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035452 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera] 118 4e-25 ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease ... 107 1e-21 ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus] 107 1e-21 gb|AAM98196.1| exonuclease, putative [Arabidopsis thaliana] 105 3e-21 ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana] gi|3321... 105 4e-21 >ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera] Length = 658 Score = 118 bits (296), Expect = 4e-25 Identities = 54/95 (56%), Positives = 74/95 (77%) Frame = -3 Query: 295 DDLDFLGPAMSQVLVKGIARGDVNPITKMPFQGESVHTEMVMDRSYPLKEFKLERGRRQL 116 DDLDFLGP +SQ + KGIA GD++P TKMPFQG++ +++D +Y L+ FK E R+++ Sbjct: 303 DDLDFLGPLISQDIAKGIATGDLDPFTKMPFQGQNASDGLLLDGTYQLESFKPESERKKI 362 Query: 115 DLPAQKNVLTNYFCPASVEAKREFKAPRMTPTPLN 11 +LPAQKN+LTNYFC S+EAK +F+APR+TP N Sbjct: 363 ELPAQKNLLTNYFCFTSLEAKGKFRAPRITPNDSN 397 >ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis sativus] Length = 685 Score = 107 bits (266), Expect = 1e-21 Identities = 50/90 (55%), Positives = 67/90 (74%) Frame = -3 Query: 295 DDLDFLGPAMSQVLVKGIARGDVNPITKMPFQGESVHTEMVMDRSYPLKEFKLERGRRQL 116 DDLDFLGP++ Q + KGIA GD++P T +PFQ + +T +V +R Y LKEF +++L Sbjct: 303 DDLDFLGPSIPQHIAKGIAEGDIDPCTNLPFQEQDTNTGVVHERPYKLKEFNAGCIKKKL 362 Query: 115 DLPAQKNVLTNYFCPASVEAKREFKAPRMT 26 DLP QKNVLT YFC AS+EAKR+F AP+ + Sbjct: 363 DLPVQKNVLTKYFCFASLEAKRKFTAPKQS 392 >ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus] Length = 685 Score = 107 bits (266), Expect = 1e-21 Identities = 50/90 (55%), Positives = 67/90 (74%) Frame = -3 Query: 295 DDLDFLGPAMSQVLVKGIARGDVNPITKMPFQGESVHTEMVMDRSYPLKEFKLERGRRQL 116 DDLDFLGP++ Q + KGIA GD++P T +PFQ + +T +V +R Y LKEF +++L Sbjct: 303 DDLDFLGPSIPQHIAKGIAEGDIDPCTNLPFQEQDTNTGVVHERPYKLKEFNAGCIKKKL 362 Query: 115 DLPAQKNVLTNYFCPASVEAKREFKAPRMT 26 DLP QKNVLT YFC AS+EAKR+F AP+ + Sbjct: 363 DLPVQKNVLTKYFCFASLEAKRKFTAPKQS 392 >gb|AAM98196.1| exonuclease, putative [Arabidopsis thaliana] Length = 665 Score = 105 bits (263), Expect = 3e-21 Identities = 51/94 (54%), Positives = 69/94 (73%) Frame = -3 Query: 295 DDLDFLGPAMSQVLVKGIARGDVNPITKMPFQGESVHTEMVMDRSYPLKEFKLERGRRQL 116 +D DF+GP+M Q + KGIA G ++P T++PFQ ESV ++ +D K FK E +++L Sbjct: 233 EDSDFVGPSMPQDIAKGIALGQLDPFTQLPFQAESVTPKLAVDDISRPKSFKPETVKKKL 292 Query: 115 DLPAQKNVLTNYFCPASVEAKREFKAPRMTPTPL 14 DLP QKN+LT YFC ASVEAKR+FKAPR++P L Sbjct: 293 DLPVQKNLLTKYFCLASVEAKRKFKAPRISPMSL 326 >ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana] gi|332192992|gb|AEE31113.1| exonuclease 1 [Arabidopsis thaliana] Length = 581 Score = 105 bits (262), Expect = 4e-21 Identities = 51/94 (54%), Positives = 69/94 (73%) Frame = -3 Query: 295 DDLDFLGPAMSQVLVKGIARGDVNPITKMPFQGESVHTEMVMDRSYPLKEFKLERGRRQL 116 +D DF+GP+M Q + KGIA G ++P T++PFQ ESV ++ +D K FK E +++L Sbjct: 149 EDSDFVGPSMPQDIAKGIALGQLDPFTQLPFQAESVTPKLAVDDISRPKSFKPETVKKKL 208 Query: 115 DLPAQKNVLTNYFCPASVEAKREFKAPRMTPTPL 14 DLP QKN+LT YFC ASVEAKR+FKAPR++P L Sbjct: 209 DLPVQKNLLTKYFCFASVEAKRKFKAPRISPMSL 242