BLASTX nr result

ID: Coptis24_contig00035445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035445
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317560.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-49
ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260...   151   8e-49
emb|CBI20489.3| unnamed protein product [Vitis vinifera]              151   8e-49
emb|CAN83989.1| hypothetical protein VITISV_039126 [Vitis vinifera]   150   2e-47
ref|XP_002272624.2| PREDICTED: uncharacterized protein LOC100244...   144   7e-47

>ref|XP_002317560.1| predicted protein [Populus trichocarpa] gi|222860625|gb|EEE98172.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  153 bits (387), Expect(2) = 2e-49
 Identities = 76/113 (67%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
 Frame = -1

Query: 338 QSQQLPKKHSRCLADGNELLRFYXXXXXXXXXXXXXXXC-ISEKCSVCRIIRHGFSTKKE 162
           ++ +LPKKHSRC+ADGNELLRFY                 ISEKC VCRIIR+GFS KKE
Sbjct: 287 KASKLPKKHSRCIADGNELLRFYGTTVACSLGINGSSSLCISEKCRVCRIIRNGFSAKKE 346

Query: 161 LRDGIGVFTTSTSERAFESVELHEENPSTRKALMVCRVIAGRVHRPLENLQEL 3
           L+ G+GVFTTSTS RAFES+E+ E++PSTRKAL+VCRVIAGRVHRPLEN+QE+
Sbjct: 347 LKGGVGVFTTSTSGRAFESIEIFEDDPSTRKALIVCRVIAGRVHRPLENIQEI 399



 Score = 67.4 bits (163), Expect(2) = 2e-49
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = -2

Query: 442 LKSANNCARIERVLKVHNMQKTLARFEEYREVVKNKAS 329
           LKS N+C RIERVLKVHNMQKTLARFEEYRE VK KAS
Sbjct: 252 LKSENHCGRIERVLKVHNMQKTLARFEEYRETVKIKAS 289


>ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260605 [Vitis vinifera]
          Length = 483

 Score =  151 bits (382), Expect(2) = 8e-49
 Identities = 75/113 (66%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
 Frame = -1

Query: 338 QSQQLPKKHSRCLADGNELLRFYXXXXXXXXXXXXXXXC-ISEKCSVCRIIRHGFSTKKE 162
           ++ +LPKKH RCLADGNELLRFY                 IS+KC VCRIIRHGFS KKE
Sbjct: 331 KASKLPKKHPRCLADGNELLRFYGTTMTCALGVNGSSNLCISDKCCVCRIIRHGFSAKKE 390

Query: 161 LRDGIGVFTTSTSERAFESVELHEENPSTRKALMVCRVIAGRVHRPLENLQEL 3
           L+ GIGVFTTSTS RAFES+E+++E+PS RKAL+VCRVIAGRVHRPLEN+Q++
Sbjct: 391 LKGGIGVFTTSTSGRAFESIEVYDEDPSIRKALIVCRVIAGRVHRPLENIQDM 443



 Score = 67.4 bits (163), Expect(2) = 8e-49
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -2

Query: 442 LKSANNCARIERVLKVHNMQKTLARFEEYREVVKNKAS 329
           LKS N+C RIERVLKVHNMQKTL RFEEYRE+VK KAS
Sbjct: 296 LKSENHCGRIERVLKVHNMQKTLGRFEEYREMVKTKAS 333


>emb|CBI20489.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  151 bits (382), Expect(2) = 8e-49
 Identities = 75/113 (66%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
 Frame = -1

Query: 338 QSQQLPKKHSRCLADGNELLRFYXXXXXXXXXXXXXXXC-ISEKCSVCRIIRHGFSTKKE 162
           ++ +LPKKH RCLADGNELLRFY                 IS+KC VCRIIRHGFS KKE
Sbjct: 240 KASKLPKKHPRCLADGNELLRFYGTTMTCALGVNGSSNLCISDKCCVCRIIRHGFSAKKE 299

Query: 161 LRDGIGVFTTSTSERAFESVELHEENPSTRKALMVCRVIAGRVHRPLENLQEL 3
           L+ GIGVFTTSTS RAFES+E+++E+PS RKAL+VCRVIAGRVHRPLEN+Q++
Sbjct: 300 LKGGIGVFTTSTSGRAFESIEVYDEDPSIRKALIVCRVIAGRVHRPLENIQDM 352



 Score = 67.4 bits (163), Expect(2) = 8e-49
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -2

Query: 442 LKSANNCARIERVLKVHNMQKTLARFEEYREVVKNKAS 329
           LKS N+C RIERVLKVHNMQKTL RFEEYRE+VK KAS
Sbjct: 205 LKSENHCGRIERVLKVHNMQKTLGRFEEYREMVKTKAS 242


>emb|CAN83989.1| hypothetical protein VITISV_039126 [Vitis vinifera]
          Length = 429

 Score =  150 bits (380), Expect(2) = 2e-47
 Identities = 75/113 (66%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = -1

Query: 338 QSQQLPKKHSRCLADGNELLRFYXXXXXXXXXXXXXXXC-ISEKCSVCRIIRHGFSTKKE 162
           ++  LPKKH RCLADGNELLRFY                 IS+KC VCRIIRHGFS KKE
Sbjct: 277 KASXLPKKHPRCLADGNELLRFYGTTMTCALGVNGSSNLCISDKCCVCRIIRHGFSAKKE 336

Query: 161 LRDGIGVFTTSTSERAFESVELHEENPSTRKALMVCRVIAGRVHRPLENLQEL 3
           L+ GIGVFTTSTS RAFES+E+++E+PS RKAL+VCRVIAGRVHRPLEN+Q++
Sbjct: 337 LKGGIGVFTTSTSGRAFESIEVYDEDPSIRKALIVCRVIAGRVHRPLENIQDM 389



 Score = 63.9 bits (154), Expect(2) = 2e-47
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 442 LKSANNCARIERVLKVHNMQKTLARFEEYREVVKNKAS 329
           LKS N+C R+ RVLKVHNMQKTL RFEEYRE+VK KAS
Sbjct: 242 LKSENHCGRMXRVLKVHNMQKTLGRFEEYREMVKTKAS 279


>ref|XP_002272624.2| PREDICTED: uncharacterized protein LOC100244205 [Vitis vinifera]
          Length = 442

 Score =  144 bits (362), Expect(2) = 7e-47
 Identities = 72/113 (63%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = -1

Query: 338 QSQQLPKKHSRCLADGNELLRFYXXXXXXXXXXXXXXXCI-SEKCSVCRIIRHGFSTKKE 162
           ++ +LPKKH RCLADGNELLRF+                  S+KCSVCRI+RHGFSTKKE
Sbjct: 290 KASKLPKKHPRCLADGNELLRFHGTTIACSLGMNGSSSLCTSDKCSVCRILRHGFSTKKE 349

Query: 161 LRDGIGVFTTSTSERAFESVELHEENPSTRKALMVCRVIAGRVHRPLENLQEL 3
           +  G+GVFTTSTS  AFES++L+EEN S  +AL+VCRVIAGRVHRPLEN+QEL
Sbjct: 350 VNGGVGVFTTSTSGSAFESIKLNEENQSVGRALIVCRVIAGRVHRPLENIQEL 402



 Score = 68.6 bits (166), Expect(2) = 7e-47
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -2

Query: 442 LKSANNCARIERVLKVHNMQKTLARFEEYREVVKNKAS 329
           LKS N+C RIERVLKVHNMQKTLARFEEYRE+VK KAS
Sbjct: 255 LKSENSCGRIERVLKVHNMQKTLARFEEYREIVKIKAS 292


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