BLASTX nr result

ID: Coptis24_contig00035443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035443
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303604.1| predicted protein [Populus trichocarpa] gi|1...   112   2e-23
ref|XP_002299512.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002278988.1| PREDICTED: uncharacterized protein LOC100250...   110   9e-23
gb|ABK93358.1| unknown [Populus trichocarpa]                          110   1e-22
ref|XP_002509849.1| SP1L, putative [Ricinus communis] gi|2235497...   103   1e-20

>ref|XP_002303604.1| predicted protein [Populus trichocarpa] gi|118481859|gb|ABK92866.1|
           unknown [Populus trichocarpa]
           gi|118484209|gb|ABK93985.1| unknown [Populus
           trichocarpa] gi|222841036|gb|EEE78583.1| predicted
           protein [Populus trichocarpa]
          Length = 99

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/90 (67%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   SSLGYLFGSDE-PTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN--VTNYYFRTQGQN 172
           SSLGYLFGSDE P+ PP     PV  PP+G D T EK+P   +     V+N Y R QGQN
Sbjct: 12  SSLGYLFGSDEQPSAPP--PSRPVNLPPYGVDITIEKSPDSGSSEKKPVSNNYHRAQGQN 69

Query: 173 TGNFITDRPSTKVRSVPGGDSSLGYLFGDK 262
           TGNFITDRPSTKV+SVPGGDSSLGYLFGDK
Sbjct: 70  TGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99


>ref|XP_002299512.1| predicted protein [Populus trichocarpa] gi|222846770|gb|EEE84317.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/90 (67%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   SSLGYLFGSDE-PTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN--VTNYYFRTQGQN 172
           SSLGYLFGSDE P+ PP +   PV  PP+G D T EK P   +     V+N Y R QGQN
Sbjct: 12  SSLGYLFGSDEQPSAPPPLR--PVNLPPYGVDITVEKPPDSGSAEKKQVSNNYHRAQGQN 69

Query: 173 TGNFITDRPSTKVRSVPGGDSSLGYLFGDK 262
           TGNFITDRPSTKV+SVPGGDSSLGYLFGDK
Sbjct: 70  TGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99


>ref|XP_002278988.1| PREDICTED: uncharacterized protein LOC100250191 [Vitis vinifera]
           gi|297742229|emb|CBI34378.3| unnamed protein product
           [Vitis vinifera]
          Length = 100

 Score =  110 bits (276), Expect = 9e-23
 Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
 Frame = +2

Query: 2   SSLGYLFGSDE-PTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPS---NVTNYYFRTQGQ 169
           SSLGYLFGSDE P+ PP+     +  PP+G D   EK P    P+   + +N Y RTQGQ
Sbjct: 12  SSLGYLFGSDEQPSEPPV--SPTIQLPPYGIDTIPEKPPNRPPPAEKQSSSNNYQRTQGQ 69

Query: 170 NTGNFITDRPSTKVRSVPGGDSSLGYLFGDK 262
           NTGNFITDRPSTKVRSVPGGDSSLGYLFGDK
Sbjct: 70  NTGNFITDRPSTKVRSVPGGDSSLGYLFGDK 100


>gb|ABK93358.1| unknown [Populus trichocarpa]
          Length = 99

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/90 (66%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   SSLGYLFGSDE-PTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN--VTNYYFRTQGQN 172
           SSLGYLFGSDE P+ PP +   PV  PP+G D T EK P   +     V+N Y R QGQN
Sbjct: 12  SSLGYLFGSDEQPSAPPPLR--PVNLPPYGVDITVEKPPDSGSAEKKQVSNNYHRAQGQN 69

Query: 173 TGNFITDRPSTKVRSVPGGDSSLGYLFGDK 262
           TGNFI DRPSTKV+SVPGGDSSLGYLFGDK
Sbjct: 70  TGNFIADRPSTKVKSVPGGDSSLGYLFGDK 99


>ref|XP_002509849.1| SP1L, putative [Ricinus communis] gi|223549748|gb|EEF51236.1| SP1L,
           putative [Ricinus communis]
          Length = 100

 Score =  103 bits (258), Expect = 1e-20
 Identities = 61/95 (64%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
 Frame = +2

Query: 2   SSLGYLFGSDE-PTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN-------VTNYYFR 157
           SSLGYLFGSDE PT PP      V  PP+G D   EK      P+N       V+N Y R
Sbjct: 12  SSLGYLFGSDENPTTPP--PSQTVNLPPYGVDVIPEKNN----PNNLSAEKGKVSNNYHR 65

Query: 158 TQGQNTGNFITDRPSTKVRSVPGGDSSLGYLFGDK 262
            QGQNTGNFITDRPSTKV+SVPGGDSSLGYLFGDK
Sbjct: 66  AQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK 100


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