BLASTX nr result

ID: Coptis24_contig00035442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035442
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trich...    89   3e-16
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...    89   4e-16
ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trich...    88   6e-16
ref|XP_002333124.1| cc-nbs resistance protein [Populus trichocar...    88   8e-16
gb|ADH03611.1| nucleotide binding site and leucine rich repeat p...    87   2e-15

>ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859576|gb|EEE97123.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 906

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/79 (51%), Positives = 57/79 (72%)
 Frame = +2

Query: 2   SEPFDRVRVAKEIIEQAGEKVQDVIAWEVLHNLLCESLRGKKFFLVLDDVWTDDANEWDP 181
           SEPFD VR+AK IIEQ      +++  + L   + ES++GK+F LVLDDVWT++  +W+P
Sbjct: 215 SEPFDEVRIAKAIIEQLEGSPTNLVELQSLLQRVSESIKGKRFLLVLDDVWTENHGQWEP 274

Query: 182 FKHALNGGASGSRVLITTR 238
            K +L GGA GSR+L+TTR
Sbjct: 275 LKLSLKGGAPGSRILVTTR 293


>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 906

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/81 (54%), Positives = 57/81 (70%)
 Frame = +2

Query: 2   SEPFDRVRVAKEIIEQAGEKVQDVIAWEVLHNLLCESLRGKKFFLVLDDVWTDDANEWDP 181
           SEPFDR+R+AK II  A +++   I W+ L   L +S+ GKKF LVLDDVWT+D   W+P
Sbjct: 234 SEPFDRIRIAKTIIN-AFDELHTYILWQHLQEHLRKSVMGKKFLLVLDDVWTNDFRIWEP 292

Query: 182 FKHALNGGASGSRVLITTRSE 244
            K  L  GA GSR+L+TTR+E
Sbjct: 293 IKVPLKSGAPGSRILVTTRNE 313


>ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832449|gb|EEE70926.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 766

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/79 (49%), Positives = 57/79 (72%)
 Frame = +2

Query: 2   SEPFDRVRVAKEIIEQAGEKVQDVIAWEVLHNLLCESLRGKKFFLVLDDVWTDDANEWDP 181
           S+PFD VR+AK I+EQ   +  D++  + L   + ES++GK+F LVLDDVWT++  +W+ 
Sbjct: 205 SDPFDEVRIAKAILEQLEGRAPDLVELQSLLQRVSESIKGKRFLLVLDDVWTENHRQWEQ 264

Query: 182 FKHALNGGASGSRVLITTR 238
            K +L GGA GSR+L+TTR
Sbjct: 265 LKPSLTGGAPGSRILVTTR 283


>ref|XP_002333124.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222834935|gb|EEE73384.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 486

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/79 (48%), Positives = 57/79 (72%)
 Frame = +2

Query: 2   SEPFDRVRVAKEIIEQAGEKVQDVIAWEVLHNLLCESLRGKKFFLVLDDVWTDDANEWDP 181
           S+PFD VR+ K I+EQ   +  D++  + L   + ES++GK+F LVLDDVWT++  +W+P
Sbjct: 235 SDPFDEVRIGKAILEQLEGRAPDLVELQSLLQRVSESIKGKRFLLVLDDVWTENHGQWEP 294

Query: 182 FKHALNGGASGSRVLITTR 238
            K +L GGA GSR+L+T+R
Sbjct: 295 LKLSLKGGAPGSRILVTSR 313


>gb|ADH03611.1| nucleotide binding site and leucine rich repeat protein 7 [Solanum
           melongena]
          Length = 179

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/93 (45%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = +2

Query: 2   SEPFDRVRVAKEIIEQAGEKVQDVIAWEVLHNLLCESLRGKKFFLVLDDVWTDDANEWDP 181
           S+PFD V+VAK I+E   +   ++  + +L   + E +  KKFFLVLDDVW++D ++W+P
Sbjct: 40  SDPFDEVKVAKAILEGLSKSSPNLSQFHMLLERIQECVSMKKFFLVLDDVWSEDYSKWEP 99

Query: 182 FKHALNGGASGSRVLITTRSEK--QMIGSTQNY 274
            K++L  GA GSR+L+T+RSE+   M+GS+  Y
Sbjct: 100 LKNSLKNGAPGSRILVTSRSERVVAMMGSSYMY 132


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