BLASTX nr result

ID: Coptis24_contig00035439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035439
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280856.2| PREDICTED: uncharacterized protein LOC100250...   128   6e-28
emb|CAN70392.1| hypothetical protein VITISV_020518 [Vitis vinifera]   125   3e-27
ref|XP_002514286.1| hypothetical protein RCOM_1052490 [Ricinus c...   118   4e-25
ref|XP_002324996.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004167138.1| PREDICTED: uncharacterized LOC101223218 [Cuc...    95   7e-18

>ref|XP_002280856.2| PREDICTED: uncharacterized protein LOC100250746 [Vitis vinifera]
          Length = 860

 Score =  128 bits (321), Expect = 6e-28
 Identities = 72/117 (61%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
 Frame = -2

Query: 342 ESLRSVVYRSLVTCDDPNGVVEYETMRKSKKGSRK-EHKIERCGTSNDS--SRYSAHKEK 172
           +S RSV YRS VTCDDP GVVE  T+RKSK  S+K +HKIE  GT   S  S     + +
Sbjct: 7   DSRRSVGYRSFVTCDDPKGVVECGTIRKSKNDSKKLKHKIESRGTPKKSITSLICKEERR 66

Query: 171 ELFSNVITEELHIPSPFQILEVSKGAQKLNLMIDTWSKGLSFDEQSKDIARDLLKGA 1
           E+ S   TE LH PS FQ+LEVS+GAQKLN MID+WS+G S DEQS DIA+DLLKGA
Sbjct: 67  EMESKGTTEGLHNPSTFQLLEVSRGAQKLNKMIDSWSQGPSIDEQSNDIAKDLLKGA 123


>emb|CAN70392.1| hypothetical protein VITISV_020518 [Vitis vinifera]
          Length = 808

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/117 (60%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = -2

Query: 342 ESLRSVVYRSLVTCDDPNGVVEYETMRKSKKGSRK-EHKIERCGTSNDS--SRYSAHKEK 172
           +S RSV YRS VTCDDP GVVE  T+RKSK  S+K +HKIE  GT   S  S     + +
Sbjct: 18  DSRRSVGYRSFVTCDDPKGVVECGTIRKSKNDSKKLKHKIESRGTPKKSITSLICKEERR 77

Query: 171 ELFSNVITEELHIPSPFQILEVSKGAQKLNLMIDTWSKGLSFDEQSKDIARDLLKGA 1
           E+ S   TE LH PS FQ+LEVS+GAQKLN MID+WS+G S DE S DIA+DLLKGA
Sbjct: 78  EMESKGXTEGLHNPSTFQLLEVSRGAQKLNKMIDSWSQGPSIDEXSNDIAKDLLKGA 134


>ref|XP_002514286.1| hypothetical protein RCOM_1052490 [Ricinus communis]
           gi|223546742|gb|EEF48240.1| hypothetical protein
           RCOM_1052490 [Ricinus communis]
          Length = 887

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/112 (58%), Positives = 81/112 (72%), Gaps = 4/112 (3%)
 Frame = -2

Query: 324 VYRSLVTCDDPNGVVEYETMRKSKKGSRK--EHKIERCGTSNDSSRYSAHKEK--ELFSN 157
           +YRS VTCDDP GVVE  T+RKSK  S+K  E KI+   T  +S+   AHK K  E+   
Sbjct: 1   MYRSFVTCDDPKGVVECGTIRKSKSVSQKIEEDKIKTHRTRKNSNTSLAHKGKKEEMVPK 60

Query: 156 VITEELHIPSPFQILEVSKGAQKLNLMIDTWSKGLSFDEQSKDIARDLLKGA 1
              E+ H PS FQ+LEVS+GAQKLN +ID+WSKGL++D QSKDIA+DLLKGA
Sbjct: 61  GNAEDNHSPSSFQLLEVSRGAQKLNHLIDSWSKGLNYDGQSKDIAKDLLKGA 112


>ref|XP_002324996.1| predicted protein [Populus trichocarpa] gi|222866430|gb|EEF03561.1|
           predicted protein [Populus trichocarpa]
          Length = 899

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 3/111 (2%)
 Frame = -2

Query: 324 VYRSLVTCDDPNGVVEYETMRKSKKGSRK-EHKI--ERCGTSNDSSRYSAHKEKELFSNV 154
           +YRS VTCDDP GVVE  T+RKSK GS K EH+I   +   ++ +      ++KEL S  
Sbjct: 1   MYRSFVTCDDPKGVVECGTIRKSKSGSHKMEHEIISHKAQKNSKADLTVIAEKKELVSKG 60

Query: 153 ITEELHIPSPFQILEVSKGAQKLNLMIDTWSKGLSFDEQSKDIARDLLKGA 1
           I EE   PS FQ+LEVS+GAQKLN  I++WSKGLS D QSKDIA+DLLKGA
Sbjct: 61  IVEEYRTPSSFQLLEVSRGAQKLNQTINSWSKGLSSDGQSKDIAKDLLKGA 111


>ref|XP_004167138.1| PREDICTED: uncharacterized LOC101223218 [Cucumis sativus]
          Length = 797

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/115 (45%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
 Frame = -2

Query: 342 ESLRSVVYRSLVTCDDPNGVVEYETMRKSKKGSRK-EHKIERCGTSNDSSR--YSAHKEK 172
           +S++SVVYRS +TCDDP GVV+   M+ SK  SRK E KI    TS +SS+   S  +++
Sbjct: 4   DSVKSVVYRSFITCDDPKGVVDCSLMKISKMNSRKLEQKIRAHRTSRNSSKGLVSDLEKE 63

Query: 171 ELFSNVITEELHIPSPFQILEVSKGAQKLNLMIDTWSKGLSFDEQSKDIARDLLK 7
           EL S  + E +H  S    +EV +GA+KLN M+ +WSKG+  + +++ IA DLL+
Sbjct: 64  ELISKKMRERIHGQSSIPFMEVCQGAEKLNHMVGSWSKGMRSESKTEKIAEDLLE 118


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