BLASTX nr result

ID: Coptis24_contig00035437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035437
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [S...   130   1e-28
ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resista...   120   2e-25
ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002969152.1| ATP-binding cassette transporter [Selaginell...    82   5e-14
ref|XP_002973910.1| hypothetical protein SELMODRAFT_2077 [Selagi...    82   5e-14

>ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [Sorghum bicolor]
            gi|241944069|gb|EES17214.1| hypothetical protein
            SORBIDRAFT_08g018460 [Sorghum bicolor]
          Length = 1532

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/92 (65%), Positives = 71/92 (77%)
 Frame = +1

Query: 10   TLLKCLSGRTPIDGKLTGKLHVNGFKPCTTYSRLIGYVETVDAHPPYLSVRESLQFSAGL 189
            TLLKCLSGRTP+ G  TG + VNG KPC  +SR +GY E +DAH PYL++RESL+FSA L
Sbjct: 970  TLLKCLSGRTPLGGSFTGDIQVNGTKPCADFSRRVGYAERLDAHQPYLTIRESLEFSANL 1029

Query: 190  RLDRSVDSMNRHIHVELVLDQLGLMLYANHLV 285
            RL  S+    RH+HVELVLDQLGL  YAN+LV
Sbjct: 1030 RLTNSISKARRHMHVELVLDQLGLQYYANNLV 1061


>ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resistance protein 7-like [Vitis
            vinifera]
          Length = 1538

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/95 (65%), Positives = 75/95 (78%)
 Frame = +1

Query: 1    SRNTLLKCLSGRTPIDGKLTGKLHVNGFKPCTTYSRLIGYVETVDAHPPYLSVRESLQFS 180
            S+ TLLKCL+GR P++G LTG L+ NG     T+SRLIGYVE +DAH PYLSVRE+LQFS
Sbjct: 979  SKATLLKCLAGRKPLNGCLTGNLNANGIS-AGTFSRLIGYVEKLDAHQPYLSVRETLQFS 1037

Query: 181  AGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLV 285
            A LRL +++   NR IHVELVL+QLGLM Y+N LV
Sbjct: 1038 AALRLGQAISLTNRCIHVELVLNQLGLMPYSNQLV 1072


>ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|222857845|gb|EEE95392.1|
            predicted protein [Populus trichocarpa]
          Length = 1605

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/95 (63%), Positives = 71/95 (74%)
 Frame = +1

Query: 1    SRNTLLKCLSGRTPIDGKLTGKLHVNGFKPCTTYSRLIGYVETVDAHPPYLSVRESLQFS 180
            ++ TLLKCL+GR P     TG L  NGF+P   + RLIGYVE +DAH PYLS+RESLQFS
Sbjct: 1049 NKATLLKCLAGRVPC----TGNLQANGFRPGAPFCRLIGYVEKLDAHQPYLSIRESLQFS 1104

Query: 181  AGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLV 285
            A LRL + V SM R+IHVELVL QLGL+ Y+N LV
Sbjct: 1105 AALRLGKEVGSMMRNIHVELVLSQLGLLPYSNQLV 1139


>ref|XP_002969152.1| ATP-binding cassette transporter [Selaginella moellendorffii]
            gi|300163657|gb|EFJ30268.1| ATP-binding cassette
            transporter [Selaginella moellendorffii]
          Length = 1483

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
 Frame = +1

Query: 4    RNTLLKCLSGRTPIDGKLTGKLHVNGFK-PCTTYSRLIGYVETVDAHPPYLSVRESLQFS 180
            ++TLLKCL+GR P +G++     VNG +   T + R+ G+ E V+ H PYL+VRESL+FS
Sbjct: 911  KSTLLKCLAGRMPSEGEVL----VNGVRLKKTCFHRISGFAENVEMHQPYLTVRESLEFS 966

Query: 181  AGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLV 285
            A LRL R + S ++  HV+L+L+  GL   +N LV
Sbjct: 967  ANLRLRRHISSADKARHVDLILELTGLSHVSNKLV 1001


>ref|XP_002973910.1| hypothetical protein SELMODRAFT_2077 [Selaginella moellendorffii]
           gi|300158242|gb|EFJ24865.1| hypothetical protein
           SELMODRAFT_2077 [Selaginella moellendorffii]
          Length = 385

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
 Frame = +1

Query: 4   RNTLLKCLSGRTPIDGKLTGKLHVNGFK-PCTTYSRLIGYVETVDAHPPYLSVRESLQFS 180
           ++TLLKCL+GR P +G++     VNG +   T + R+ G+ E V+ H PYL+VRESL+FS
Sbjct: 8   KSTLLKCLAGRMPSEGEVL----VNGVRLKKTCFHRISGFAENVEMHQPYLTVRESLEFS 63

Query: 181 AGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLV 285
           A LRL R + S ++  HV+L+L+  GL   +N LV
Sbjct: 64  ANLRLRRHISSADKARHVDLILELTGLSHVSNKLV 98


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