BLASTX nr result
ID: Coptis24_contig00035431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00035431
(279 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529182.1| multidrug resistance protein 1, 2, putative ... 134 6e-30
ref|XP_003632759.1| PREDICTED: ABC transporter B family member 1... 131 6e-29
ref|XP_003548375.1| PREDICTED: ABC transporter B family member 1... 126 2e-27
ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, AB... 125 5e-27
ref|XP_003627370.1| ABC transporter B family member [Medicago tr... 124 6e-27
>ref|XP_002529182.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
gi|223531360|gb|EEF33196.1| multidrug resistance protein
1, 2, putative [Ricinus communis]
Length = 1580
Score = 134 bits (338), Expect = 6e-30
Identities = 62/92 (67%), Positives = 83/92 (90%)
Frame = +2
Query: 2 QLAGLAPDTSNAPSAVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRP 181
QLAGLAPDT+ A +++P++ D+I R+PLI ++++KGR++D SKPL +EF+ V+F+YPSRP
Sbjct: 1288 QLAGLAPDTTMARTSIPSIFDIIHRQPLIGNDREKGRQIDRSKPLDIEFRKVTFAYPSRP 1347
Query: 182 EIMVLRDFSMKVRGGSMVALVGGSGSGKSTVI 277
EIMVLRDF +KV+GGSMVALVGGSGSGKSTV+
Sbjct: 1348 EIMVLRDFYLKVKGGSMVALVGGSGSGKSTVV 1379
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +2
Query: 44 AVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRPEIMVLRDFSMKVRG 223
A V ++I R P ID GR + + +EFK V FSYPSRP+ ++LR ++ +
Sbjct: 660 AASRVYEIIDRIPDIDPYGSHGRTLPNVRG-RIEFKSVIFSYPSRPDTLILRSLNLVIPS 718
Query: 224 GSMVALVGGSGSGKSTV 274
VALVG SG GKST+
Sbjct: 719 SKTVALVGTSGGGKSTI 735
>ref|XP_003632759.1| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
Length = 1542
Score = 131 bits (329), Expect = 6e-29
Identities = 62/92 (67%), Positives = 79/92 (85%)
Frame = +2
Query: 2 QLAGLAPDTSNAPSAVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRP 181
QLAGLAPDTS A +AVPAV +I R+P+I + +KGRKV+ SKP+ +E K+V+F+YPSRP
Sbjct: 1250 QLAGLAPDTSMAATAVPAVFSIINRRPMISSDGEKGRKVERSKPVDVELKMVTFAYPSRP 1309
Query: 182 EIMVLRDFSMKVRGGSMVALVGGSGSGKSTVI 277
E+ VLR+F +KV+GGSMVALVGGSGSGKSTV+
Sbjct: 1310 EVTVLREFCLKVKGGSMVALVGGSGSGKSTVV 1341
Score = 62.8 bits (151), Expect = 3e-08
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = +2
Query: 44 AVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRPEIMVLRDFSMKVRG 223
A V ++I R P ID +GRK+ + +EFK V+F+YPSRP +LR +++V
Sbjct: 621 AASRVFEIIDRVPEIDPYSPEGRKLPSIRG-RIEFKGVTFAYPSRPTAAILRSLNLEVPS 679
Query: 224 GSMVALVGGSGSGKSTV 274
+ALVG SG GKST+
Sbjct: 680 SKTLALVGSSGGGKSTI 696
>ref|XP_003548375.1| PREDICTED: ABC transporter B family member 19-like [Glycine max]
Length = 1515
Score = 126 bits (317), Expect = 2e-27
Identities = 62/92 (67%), Positives = 78/92 (84%)
Frame = +2
Query: 2 QLAGLAPDTSNAPSAVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRP 181
QLAGLAPDT+ A +A+PAV D+I R+PLID+++ KGR VD SK ++EFK+V+F+YPSRP
Sbjct: 1223 QLAGLAPDTTMAAAAIPAVQDIIKRRPLIDNDRTKGRIVDRSKRFNIEFKMVTFAYPSRP 1282
Query: 182 EIMVLRDFSMKVRGGSMVALVGGSGSGKSTVI 277
E+ VLRDF +KV+ GS VALVG SGSGKSTVI
Sbjct: 1283 EVTVLRDFCLKVKAGSTVALVGPSGSGKSTVI 1314
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +2
Query: 44 AVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRPEIMVLRDFSMKVRG 223
A V +I R P ID +GRK+ G + +E K VSF+YPSRP+ ++L ++ +
Sbjct: 589 AASRVFYIIERIPEIDSYSPEGRKLSGVRG-RIELKSVSFAYPSRPDSLILHSLNLVLPS 647
Query: 224 GSMVALVGGSGSGKSTV 274
VALVG SG GKST+
Sbjct: 648 SKTVALVGASGGGKSTI 664
>ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, ABC transporter family
[Populus trichocarpa] gi|222873326|gb|EEF10457.1|
multidrug/pheromone exporter, MDR family, ABC transporter
family [Populus trichocarpa]
Length = 1547
Score = 125 bits (313), Expect = 5e-27
Identities = 60/92 (65%), Positives = 76/92 (82%)
Frame = +2
Query: 2 QLAGLAPDTSNAPSAVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRP 181
QLAGLAPDTS A A+ A+ D+I RKPLI ++ +G+K+D S L +E K+V+F+YPSRP
Sbjct: 1255 QLAGLAPDTSMAAPAIAAIFDIIHRKPLIRSDRDRGKKIDRSNLLDIELKMVTFAYPSRP 1314
Query: 182 EIMVLRDFSMKVRGGSMVALVGGSGSGKSTVI 277
EI+VLRDF +KV+GGS VALVGGSGSGKSTV+
Sbjct: 1315 EIIVLRDFCLKVKGGSTVALVGGSGSGKSTVV 1346
Score = 56.2 bits (134), Expect = 3e-06
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +2
Query: 44 AVPAVLDVITRKPLIDDNKQKGRKVD--GSKPLSLEFKLVSFSYPSRPEIMVLRDFSMKV 217
A V ++I R P ID GR + G + +E K V+F+YPSRPE ++LR ++ +
Sbjct: 629 AATRVYEIIDRIPDIDPYSPHGRILSTVGGR---IEIKGVTFAYPSRPETVILRSLNLVI 685
Query: 218 RGGSMVALVGGSGSGKSTV 274
+ALVG SG GKSTV
Sbjct: 686 PSAKTLALVGASGGGKSTV 704
>ref|XP_003627370.1| ABC transporter B family member [Medicago truncatula]
gi|355521392|gb|AET01846.1| ABC transporter B family
member [Medicago truncatula]
Length = 1488
Score = 124 bits (312), Expect = 6e-27
Identities = 62/92 (67%), Positives = 77/92 (83%)
Frame = +2
Query: 2 QLAGLAPDTSNAPSAVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRP 181
QLAGLAPDTS A S++PAV DVI RKPLI ++ +K +KVD SK +EFK+V+F+YPSRP
Sbjct: 1196 QLAGLAPDTSMAASSIPAVQDVINRKPLIGNDGRKTKKVDRSKAFKIEFKMVTFAYPSRP 1255
Query: 182 EIMVLRDFSMKVRGGSMVALVGGSGSGKSTVI 277
E+ VLR+F +KV+GGS VALVG SGSGKSTV+
Sbjct: 1256 EVTVLRNFCLKVQGGSTVALVGPSGSGKSTVV 1287
Score = 54.7 bits (130), Expect = 8e-06
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +2
Query: 44 AVPAVLDVITRKPLIDDNKQKGRKVDGSKPLSLEFKLVSFSYPSRPEIMVLRDFSMKVRG 223
A V +I R P ID +GRK+ + +E K V F+YPSRP+ ++L ++
Sbjct: 567 AASRVFYIIERIPEIDPYNPEGRKLSSVRG-RIELKNVIFAYPSRPDSLILNSINLVFPS 625
Query: 224 GSMVALVGGSGSGKSTV 274
+ALVG SG GKST+
Sbjct: 626 SKTLALVGASGGGKSTI 642