BLASTX nr result

ID: Coptis24_contig00035406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035406
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37538.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   133   2e-29
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]   133   2e-29
gb|ACY01922.1| hypothetical protein [Beta vulgaris]                   131   6e-29
ref|XP_002456742.1| hypothetical protein SORBIDRAFT_03g041750 [S...   130   1e-28

>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/129 (53%), Positives = 84/129 (65%), Gaps = 8/129 (6%)
 Frame = -3

Query: 367 EVLTEDESSRFQIFEGGFNKFYDRASAKLEAARFNSQPEPLFIRPSVQWYKKD---PETE 197
           E+L++D SSRFQ+FEG F K  +RA AKL  A+ NS PEPL IRPS QWY  +   P+TE
Sbjct: 261 EILSQDPSSRFQVFEG-FPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTE 319

Query: 196 MP-----TGAKKDSFGVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPGCSAMELNYVKK 32
                    A +D FG+WH+CYS HSS            PK+VVSTTP C AMELNYVKK
Sbjct: 320 RRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKK 379

Query: 31  HCLNSQVSS 5
           HC +S ++S
Sbjct: 380 HCFSSHITS 388


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/129 (53%), Positives = 84/129 (65%), Gaps = 8/129 (6%)
 Frame = -3

Query: 367 EVLTEDESSRFQIFEGGFNKFYDRASAKLEAARFNSQPEPLFIRPSVQWYKKD---PETE 197
           E+L++D SSRFQ+FEG F K  +RA AKL  A+ NS PEPL IRPS QWY  +   P+TE
Sbjct: 227 EILSQDPSSRFQVFEG-FPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTE 285

Query: 196 MP-----TGAKKDSFGVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPGCSAMELNYVKK 32
                    A +D FG+WH+CYS HSS            PK+VVSTTP C AMELNYVKK
Sbjct: 286 RRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKK 345

Query: 31  HCLNSQVSS 5
           HC +S ++S
Sbjct: 346 HCFSSHITS 354


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/129 (53%), Positives = 84/129 (65%), Gaps = 8/129 (6%)
 Frame = -3

Query: 367  EVLTEDESSRFQIFEGGFNKFYDRASAKLEAARFNSQPEPLFIRPSVQWYKKD---PETE 197
            E+L++D SSRFQ+FEG F K  +RA AKL  A+ NS PEPL IRPS QWY  +   P+TE
Sbjct: 741  EILSQDPSSRFQVFEG-FPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTE 799

Query: 196  MP-----TGAKKDSFGVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPGCSAMELNYVKK 32
                     A +D FG+WH+CYS HSS            PK+VVSTTP C AMELNYVKK
Sbjct: 800  RRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKK 859

Query: 31   HCLNSQVSS 5
            HC +S ++S
Sbjct: 860  HCFSSHITS 868


>gb|ACY01922.1| hypothetical protein [Beta vulgaris]
          Length = 551

 Score =  131 bits (329), Expect = 6e-29
 Identities = 67/132 (50%), Positives = 82/132 (62%), Gaps = 10/132 (7%)
 Frame = -3

Query: 367 EVLTEDESSRFQIFEGGFNKFYDRASAKLEAARFNSQPEPLFIRPSVQWYKKDPETEMPT 188
           ++++ED SSRF +FEG F K Y++A  K+  AR N QPEPL IRPS QWY ++ ETE+  
Sbjct: 227 QIISEDPSSRFHLFEG-FPKLYEKAKKKISEARENMQPEPLIIRPSAQWYARE-ETELTV 284

Query: 187 GAKK----------DSFGVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPGCSAMELNYV 38
             +K          D FGVWH+CYS HSS            PK VVSTTP C AMEL YV
Sbjct: 285 MERKILERSNIPVKDQFGVWHVCYSMHSSRQELEWAMELLSPKWVVSTTPECRAMELEYV 344

Query: 37  KKHCLNSQVSSD 2
           KKHC N++ S D
Sbjct: 345 KKHCFNNRASDD 356


>ref|XP_002456742.1| hypothetical protein SORBIDRAFT_03g041750 [Sorghum bicolor]
           gi|241928717|gb|EES01862.1| hypothetical protein
           SORBIDRAFT_03g041750 [Sorghum bicolor]
          Length = 619

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 2/124 (1%)
 Frame = -3

Query: 367 EVLTEDESSRFQIFEGGFNKFYDRASAKLEAARFNSQPEPLFIRPSVQWYKKDPETEMP- 191
           E++T+D SSRFQ+   GF++ YDRAS +L  AR N QPEPLFIRPS QWY      + P 
Sbjct: 227 EIITDDSSSRFQMV--GFHQLYDRASKELAVARANLQPEPLFIRPSTQWYASCARKQKPS 284

Query: 190 -TGAKKDSFGVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPGCSAMELNYVKKHCLNSQ 14
            T A++D FG+WH+C+S HSS           QP+ V+STTP C A+EL+YVKKHC  ++
Sbjct: 285 LTEAEQDEFGIWHVCFSIHSSRDELEQALQLLQPQWVISTTPPCFAIELSYVKKHCFKTR 344

Query: 13  VSSD 2
           +++D
Sbjct: 345 LTAD 348


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