BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035399
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   131   7e-29
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   129   2e-28
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   125   3e-27
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   115   5e-24
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   114   6e-24

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  131 bits (329), Expect = 7e-29
 Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
 Frame = +1

Query: 1    IILSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLH 180
            +I    L L++VL +P+F  NLI  S+L K Q   ++F  D C+ QD +  + IG G   
Sbjct: 686  VIFDSQLTLKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQR 745

Query: 181  EGLYNF*LASVCS--FQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTC 354
             GLY    ++  S  F +S  ++ WHLRLGH       +LS+  P              C
Sbjct: 746  GGLYYMHPSTNKSVVFHVSQPSDLWHLRLGHPSFSRFKLLSRLLPDIHKEIGNH-----C 800

Query: 355  TICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516
             IC Q KQTRL FP SSI T   F ++HCD+WGP  +P+H+ +R+FLTIVDDF+
Sbjct: 801  PICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFS 854


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 4/174 (2%)
 Frame = +1

Query: 7   LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186
           ++P ++L++VL +P FQ NL+ VS+L ++    V+F  D CV QD   ++ IGLG  H G
Sbjct: 457 VTPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNG 516

Query: 187 LYNF*LAS----VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTC 354
           LY   LA       ++ +  +++ WH RLGH  + PL +L+K  P              C
Sbjct: 517 LYY--LAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDSKH-----VC 569

Query: 355 TICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516
            IC   KQTRL FP+S I +   F +IHCDIWGP  + SHS A +FLTIVDD T
Sbjct: 570 DICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHT 623


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  125 bits (315), Expect = 3e-27
 Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 4/174 (2%)
 Frame = +1

Query: 7   LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186
           ++P ++L++VL +P FQ NL+ VS+L ++    V+F +D CV QD   ++  GLG  H G
Sbjct: 49  VTPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFXSDFCVVQDATTRKTXGLGKQHNG 108

Query: 187 LYNF*LAS----VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTC 354
           LY   LA       ++ +  +++ WH RLGH  + PL +L+K                 C
Sbjct: 109 LYY--LAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAK-----VNXEIYFDSKHVC 161

Query: 355 TICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516
            I    KQTRL FP+S I +   F +IHCDIWGP  + SHS AR+FLTIVDD T
Sbjct: 162 DIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGARYFLTIVDDHT 215


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  115 bits (287), Expect = 5e-24
 Identities = 65/173 (37%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
 Frame = +1

Query: 7   LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186
           LS  + L NVL++P    +LI VS+LVK      +FT+  CV QD+  +  IG G   +G
Sbjct: 430 LSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDG 489

Query: 187 LYNF*LAS---VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTCT 357
           +Y    A+   V    +++++  WH RLGH    P   +    P             +C 
Sbjct: 490 VYYLTDAATTTVHKVDITTDHALWHQRLGH----PSFSVLSSLPLFSGSSCSVSSR-SCD 544

Query: 358 ICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516
           +C + KQTR  FP+SS K++  F +IHCD+WGP+ +PS   A +FLTIVDDF+
Sbjct: 545 VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFS 597


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/173 (37%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
 Frame = +1

Query: 7   LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186
           LS  + L NVL++P    +LI VS+LVK      +FT+  CV QD+  +  IG G   +G
Sbjct: 430 LSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDG 489

Query: 187 LYNF*LAS---VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTCT 357
           +Y    A+   V    +++++  WH RLGH    P   +    P             +C 
Sbjct: 490 VYYLTDAATTTVHKVDVTTDHALWHQRLGH----PSFSVLSSLPLFSGSSCSVSSR-SCD 544

Query: 358 ICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516
           +C + KQTR  FP+SS K++  F +IHCD+WGP+ +PS   A +FLTIVDDF+
Sbjct: 545 VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFS 597