BLASTX nr result
ID: Coptis24_contig00035399
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035399 (521 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 131 7e-29 emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 129 2e-28 emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 125 3e-27 gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 115 5e-24 dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 114 6e-24 >emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] Length = 1813 Score = 131 bits (329), Expect = 7e-29 Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 2/174 (1%) Frame = +1 Query: 1 IILSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLH 180 +I L L++VL +P+F NLI S+L K Q ++F D C+ QD + + IG G Sbjct: 686 VIFDSQLTLKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQR 745 Query: 181 EGLYNF*LASVCS--FQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTC 354 GLY ++ S F +S ++ WHLRLGH +LS+ P C Sbjct: 746 GGLYYMHPSTNKSVVFHVSQPSDLWHLRLGHPSFSRFKLLSRLLPDIHKEIGNH-----C 800 Query: 355 TICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516 IC Q KQTRL FP SSI T F ++HCD+WGP +P+H+ +R+FLTIVDDF+ Sbjct: 801 PICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFS 854 >emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] Length = 1461 Score = 129 bits (325), Expect = 2e-28 Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 4/174 (2%) Frame = +1 Query: 7 LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186 ++P ++L++VL +P FQ NL+ VS+L ++ V+F D CV QD ++ IGLG H G Sbjct: 457 VTPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNG 516 Query: 187 LYNF*LAS----VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTC 354 LY LA ++ + +++ WH RLGH + PL +L+K P C Sbjct: 517 LYY--LAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDSKH-----VC 569 Query: 355 TICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516 IC KQTRL FP+S I + F +IHCDIWGP + SHS A +FLTIVDD T Sbjct: 570 DICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHT 623 >emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] Length = 1039 Score = 125 bits (315), Expect = 3e-27 Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 4/174 (2%) Frame = +1 Query: 7 LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186 ++P ++L++VL +P FQ NL+ VS+L ++ V+F +D CV QD ++ GLG H G Sbjct: 49 VTPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFXSDFCVVQDATTRKTXGLGKQHNG 108 Query: 187 LYNF*LAS----VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTC 354 LY LA ++ + +++ WH RLGH + PL +L+K C Sbjct: 109 LYY--LAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAK-----VNXEIYFDSKHVC 161 Query: 355 TICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516 I KQTRL FP+S I + F +IHCDIWGP + SHS AR+FLTIVDD T Sbjct: 162 DIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGARYFLTIVDDHT 215 >gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1413 Score = 115 bits (287), Expect = 5e-24 Identities = 65/173 (37%), Positives = 95/173 (54%), Gaps = 3/173 (1%) Frame = +1 Query: 7 LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186 LS + L NVL++P +LI VS+LVK +FT+ CV QD+ + IG G +G Sbjct: 430 LSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDG 489 Query: 187 LYNF*LAS---VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTCT 357 +Y A+ V +++++ WH RLGH P + P +C Sbjct: 490 VYYLTDAATTTVHKVDITTDHALWHQRLGH----PSFSVLSSLPLFSGSSCSVSSR-SCD 544 Query: 358 ICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516 +C + KQTR FP+SS K++ F +IHCD+WGP+ +PS A +FLTIVDDF+ Sbjct: 545 VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFS 597 >dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1491 Score = 114 bits (286), Expect = 6e-24 Identities = 65/173 (37%), Positives = 95/173 (54%), Gaps = 3/173 (1%) Frame = +1 Query: 7 LSPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEG 186 LS + L NVL++P +LI VS+LVK +FT+ CV QD+ + IG G +G Sbjct: 430 LSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDG 489 Query: 187 LYNF*LAS---VCSFQLSSNNNFWHLRLGHAFTIPL*MLSKQFPXXXXXXXXXXKTVTCT 357 +Y A+ V +++++ WH RLGH P + P +C Sbjct: 490 VYYLTDAATTTVHKVDVTTDHALWHQRLGH----PSFSVLSSLPLFSGSSCSVSSR-SCD 544 Query: 358 ICLQEKQTRLCFPNSSIKTSRSFQIIHCDIWGPFSLPSHSNARFFLTIVDDFT 516 +C + KQTR FP+SS K++ F +IHCD+WGP+ +PS A +FLTIVDDF+ Sbjct: 545 VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFS 597