BLASTX nr result

ID: Coptis24_contig00035391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035391
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74005.1| hypothetical protein VITISV_006236 [Vitis vinifera]    69   5e-10
emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]    68   7e-10
emb|CAN69756.1| hypothetical protein VITISV_008645 [Vitis vinifera]    68   9e-10
emb|CAN79073.1| hypothetical protein VITISV_031163 [Vitis vinifera]    67   1e-09
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]    67   1e-09

>emb|CAN74005.1| hypothetical protein VITISV_006236 [Vitis vinifera]
          Length = 533

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/83 (39%), Positives = 46/83 (55%)
 Frame = -1

Query: 250 DFMSMVKDFFDMGFLAHHLNNTFIVLIPKVSDVDDISEWRPISLIGSAYXXXXXXXXXXX 71
           + M   KDFF+ G     LN TF+VLIPK+   +D+S++RPISL+G  Y           
Sbjct: 75  EIMGFFKDFFERGKFVRSLNTTFLVLIPKIGRAEDLSDFRPISLVGGLYKLLAKVLTNRL 134

Query: 70  XXXXXKIISQEQGAFISDRQVLD 2
                K++S  Q AF+  RQ+LD
Sbjct: 135 KKVVGKVVSSTQKAFVEGRQILD 157


>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
          Length = 1653

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/83 (39%), Positives = 47/83 (56%)
 Frame = -1

Query: 250  DFMSMVKDFFDMGFLAHHLNNTFIVLIPKVSDVDDISEWRPISLIGSAYXXXXXXXXXXX 71
            + M + K+FF  G  A  LN TF+VLIPK    DD+ ++RPISL+GS Y           
Sbjct: 1088 EVMELFKEFFXYGSFAKSLNTTFLVLIPKKGGADDLGDFRPISLLGSLYKLLAKVLANRL 1147

Query: 70   XXXXXKIISQEQGAFISDRQVLD 2
                 +++S +Q AF+  RQ+LD
Sbjct: 1148 KKVLDRVVSVDQNAFVRGRQILD 1170


>emb|CAN69756.1| hypothetical protein VITISV_008645 [Vitis vinifera]
          Length = 1196

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/83 (39%), Positives = 46/83 (55%)
 Frame = -1

Query: 250  DFMSMVKDFFDMGFLAHHLNNTFIVLIPKVSDVDDISEWRPISLIGSAYXXXXXXXXXXX 71
            + + M KDF+D       LNNTF+VLIPK S  +D+ ++RPISL+G  Y           
Sbjct: 980  EILEMFKDFYDHSXFLKSLNNTFLVLIPKKSGAEDLRDFRPISLLGGLYKLLAKVLANRL 1039

Query: 70   XXXXXKIISQEQGAFISDRQVLD 2
                 K++S  Q AF+  RQ+LD
Sbjct: 1040 KKVVGKVVSTSQNAFVKGRQILD 1062


>emb|CAN79073.1| hypothetical protein VITISV_031163 [Vitis vinifera]
          Length = 572

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/81 (39%), Positives = 47/81 (58%)
 Frame = -1

Query: 244 MSMVKDFFDMGFLAHHLNNTFIVLIPKVSDVDDISEWRPISLIGSAYXXXXXXXXXXXXX 65
           + + K+F+D  F A  LN TF+VLIPK   V+D+ ++RPISL+G  Y             
Sbjct: 204 LELFKEFYDQSFFAKSLNTTFLVLIPKKGGVEDLRDFRPISLLGGLYKLLAKVLANRLKK 263

Query: 64  XXXKIISQEQGAFISDRQVLD 2
              K++S +Q AF+  RQ+LD
Sbjct: 264 VIGKVVSLDQNAFVMGRQILD 284


>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
          Length = 945

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/83 (40%), Positives = 48/83 (57%)
 Frame = -1

Query: 250 DFMSMVKDFFDMGFLAHHLNNTFIVLIPKVSDVDDISEWRPISLIGSAYXXXXXXXXXXX 71
           D +S  K+F++ G     LN TF+VLIPK    +D+ ++RPISL+GS Y           
Sbjct: 203 DVLSFFKEFYENGKFVKSLNATFLVLIPKKVGAEDLGDFRPISLVGSLYKWLAKVLANRL 262

Query: 70  XXXXXKIISQEQGAFISDRQVLD 2
                K+IS+ QGAF+  RQ+LD
Sbjct: 263 KKVVGKVISKAQGAFVEGRQILD 285


Top