BLASTX nr result

ID: Coptis24_contig00035372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035372
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280364.1| PREDICTED: multidrug and toxin extrusion pro...   290   6e-77
ref|XP_002514223.1| multidrug resistance pump, putative [Ricinus...   288   4e-76
ref|XP_004157950.1| PREDICTED: multidrug and toxin extrusion pro...   282   2e-74
ref|XP_004141162.1| PREDICTED: multidrug and toxin extrusion pro...   282   2e-74
ref|XP_004157307.1| PREDICTED: multidrug and toxin extrusion pro...   281   5e-74

>ref|XP_002280364.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Vitis
           vinifera]
          Length = 608

 Score =  290 bits (743), Expect = 6e-77
 Identities = 135/161 (83%), Positives = 153/161 (95%)
 Frame = -2

Query: 484 TWSAPSRECITGWKPLLKLAAPSCVSVCLEWWWYEIMIVLCGLLVNPKATIASMGVLIQT 305
           TW+APS +C+TGWKPLL+LAAPSCVSVCLEWWWYEIMIVLCGLLVNPKAT+ASMGVLIQT
Sbjct: 345 TWTAPSIDCLTGWKPLLRLAAPSCVSVCLEWWWYEIMIVLCGLLVNPKATVASMGVLIQT 404

Query: 304 TALIYIFPSSLSFAVSTRVGNELGANRPHQARISAAVSVFLAAMMGLSAMVFAAGLKDKW 125
           T+LIY+FPSSL FAVS+RVGNELGANRP +AR+SA VSVFLA +MG SA +FA+G++D+W
Sbjct: 405 TSLIYVFPSSLGFAVSSRVGNELGANRPDKARVSAMVSVFLAGVMGFSATMFASGMRDRW 464

Query: 124 AQMFTNDVEILRLTSAALPILGLCELGNCPQTVGCGVLRGS 2
            +MFT+DVEILRLTSAALPILGLCELGNCPQTVGCGVLRGS
Sbjct: 465 GRMFTSDVEILRLTSAALPILGLCELGNCPQTVGCGVLRGS 505


>ref|XP_002514223.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223546679|gb|EEF48177.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  288 bits (736), Expect = 4e-76
 Identities = 130/161 (80%), Positives = 152/161 (94%)
 Frame = -2

Query: 484 TWSAPSRECITGWKPLLKLAAPSCVSVCLEWWWYEIMIVLCGLLVNPKATIASMGVLIQT 305
           TW+ PSREC TGWKPL++LAAPSCVSVCLEWWWYEIMI+LCGLLVNPK+T+ASMG+LIQT
Sbjct: 269 TWTKPSRECFTGWKPLIQLAAPSCVSVCLEWWWYEIMIILCGLLVNPKSTVASMGILIQT 328

Query: 304 TALIYIFPSSLSFAVSTRVGNELGANRPHQARISAAVSVFLAAMMGLSAMVFAAGLKDKW 125
           T+LIYIFPSSL FAVSTRVGNELGANRPH+A++S  V+VF++A++G+ A +FA+G+KDKW
Sbjct: 329 TSLIYIFPSSLGFAVSTRVGNELGANRPHKAKLSTVVAVFISAVIGVIASMFASGMKDKW 388

Query: 124 AQMFTNDVEILRLTSAALPILGLCELGNCPQTVGCGVLRGS 2
            QMFT+D EILRLT+AALPILGLCELGNCPQTVGCGVLRGS
Sbjct: 389 GQMFTSDAEILRLTTAALPILGLCELGNCPQTVGCGVLRGS 429


>ref|XP_004157950.1| PREDICTED: multidrug and toxin extrusion protein 1-like, partial
           [Cucumis sativus]
          Length = 470

 Score =  282 bits (721), Expect = 2e-74
 Identities = 131/160 (81%), Positives = 149/160 (93%)
 Frame = -2

Query: 484 TWSAPSRECITGWKPLLKLAAPSCVSVCLEWWWYEIMIVLCGLLVNPKATIASMGVLIQT 305
           TW+APSREC++GWKPLL+LAAPSC+SVCLEWWWYEIMIVLCGLLV+PKAT+ASMGVLIQT
Sbjct: 231 TWTAPSRECLSGWKPLLELAAPSCISVCLEWWWYEIMIVLCGLLVDPKATVASMGVLIQT 290

Query: 304 TALIYIFPSSLSFAVSTRVGNELGANRPHQARISAAVSVFLAAMMGLSAMVFAAGLKDKW 125
           T+LIYIFPSSL FAVSTRVGNELG  RP +A++SA V+VF+AAMMGL A  FA G+++KW
Sbjct: 291 TSLIYIFPSSLGFAVSTRVGNELGGGRPEKAKLSAVVAVFVAAMMGLGATSFATGMRNKW 350

Query: 124 AQMFTNDVEILRLTSAALPILGLCELGNCPQTVGCGVLRG 5
           A+MFT+D EILRLTS ALPILGLCELGNCPQTVGCGVLRG
Sbjct: 351 ARMFTDDGEILRLTSVALPILGLCELGNCPQTVGCGVLRG 390


>ref|XP_004141162.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Cucumis
           sativus]
          Length = 518

 Score =  282 bits (721), Expect = 2e-74
 Identities = 131/160 (81%), Positives = 149/160 (93%)
 Frame = -2

Query: 484 TWSAPSRECITGWKPLLKLAAPSCVSVCLEWWWYEIMIVLCGLLVNPKATIASMGVLIQT 305
           TW+APSREC++GWKPLL+LAAPSC+SVCLEWWWYEIMIVLCGLLV+PKAT+ASMGVLIQT
Sbjct: 267 TWTAPSRECLSGWKPLLELAAPSCISVCLEWWWYEIMIVLCGLLVDPKATVASMGVLIQT 326

Query: 304 TALIYIFPSSLSFAVSTRVGNELGANRPHQARISAAVSVFLAAMMGLSAMVFAAGLKDKW 125
           T+LIYIFPSSL FAVSTRVGNELG  RP +A++SA V+VF+AAMMGL A  FA G+++KW
Sbjct: 327 TSLIYIFPSSLGFAVSTRVGNELGGGRPEKAKLSAVVAVFVAAMMGLGATSFATGMRNKW 386

Query: 124 AQMFTNDVEILRLTSAALPILGLCELGNCPQTVGCGVLRG 5
           A+MFT+D EILRLTS ALPILGLCELGNCPQTVGCGVLRG
Sbjct: 387 ARMFTDDGEILRLTSVALPILGLCELGNCPQTVGCGVLRG 426


>ref|XP_004157307.1| PREDICTED: multidrug and toxin extrusion protein 2-like [Cucumis
           sativus]
          Length = 538

 Score =  281 bits (718), Expect = 5e-74
 Identities = 130/161 (80%), Positives = 148/161 (91%)
 Frame = -2

Query: 484 TWSAPSRECITGWKPLLKLAAPSCVSVCLEWWWYEIMIVLCGLLVNPKATIASMGVLIQT 305
           TWS P+REC+TGW PLLKLAAPSCVSVCLEWWWYEIMI+LCGLL NPKAT+ASMGVLIQT
Sbjct: 274 TWSPPTRECLTGWTPLLKLAAPSCVSVCLEWWWYEIMIILCGLLANPKATVASMGVLIQT 333

Query: 304 TALIYIFPSSLSFAVSTRVGNELGANRPHQARISAAVSVFLAAMMGLSAMVFAAGLKDKW 125
           T+LIYIFPSSL FAVSTRVGNELGANRP +A++SA V+VFLA +MG+SA  FA  +++ W
Sbjct: 334 TSLIYIFPSSLGFAVSTRVGNELGANRPGKAKLSAVVAVFLAGIMGVSATTFAVSMRNIW 393

Query: 124 AQMFTNDVEILRLTSAALPILGLCELGNCPQTVGCGVLRGS 2
           A++FTND+EILRLTS ALPILGLCE+GNCPQTVGCGVLRGS
Sbjct: 394 ARIFTNDLEILRLTSTALPILGLCEIGNCPQTVGCGVLRGS 434


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