BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035368
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...    91   1e-16
ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4...    85   7e-15
ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4...    81   8e-14
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...    77   1e-12
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12

>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/103 (51%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   HTHVIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACFG-PSESHIPP--RQ 173
           HT++IPNYTVKALIANWCE+NNV   DPVKS+NLNQSS L ++A  G P ++H  P  R 
Sbjct: 286 HTNLIPNYTVKALIANWCESNNVKLPDPVKSLNLNQSSPLLAHAEPGAPRDAHNVPHSRA 345

Query: 174 NHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGA 302
           + P +     R T S   N++SS G      SPSH  S  EG+
Sbjct: 346 SQPMS-PESTRFTGSPGNNLVSSGGIHREGTSPSHPRSRSEGS 387


>ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 841

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/103 (48%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   HTHVIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACFGPS-ESHI--PPRQ 173
           HTH+IPNYTVKALIANWCE+NNV   DP KS NLNQ+S L  Y   G + ES +    R 
Sbjct: 289 HTHLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQASVLHGYMESGTTRESPVFAHSRS 348

Query: 174 NHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGA 302
           N P +  +    + S   N L+S GT     SP H  S  EG+
Sbjct: 349 NQPSSPESARSCSFSSPANNLTSGGTQREGTSPLHPRSTSEGS 391


>ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 838

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/103 (45%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   HTHVIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACFG---PSESHIPPRQ 173
           HT++IPNYTVKALIANWCE+NNV   DP KS NLNQ+  L  Y   G    S   +  R 
Sbjct: 286 HTNLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQACVLHGYMESGTTRESPVFVHSRS 345

Query: 174 NHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGA 302
           N P +  +    + S   N L+S GT     SP H  S  EG+
Sbjct: 346 NQPSSPESAGSRSFSSPANNLTSGGTQREGTSPLHPRSTSEGS 388


>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/97 (51%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = +3

Query: 3   HTHVIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACFG-PSESH-IPPRQN 176
           HT++IPNYTVKALIANWCE+NNV   DPVKS++ NQ SAL  +A  G P  SH    R N
Sbjct: 248 HTNLIPNYTVKALIANWCESNNVKLPDPVKSVSFNQPSALLIHAESGTPRGSHGFYSRGN 307

Query: 177 HPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSS 287
            P +     RST S   N +SSS       SP H  S
Sbjct: 308 QPMS-PESTRSTDSPDRNWISSS-VHRESTSPCHPRS 342


>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
 Frame = +3

Query: 3   HTHVIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYA-CFGPSESHIPP--RQ 173
           HT++IPNYTVKALIANWCE+NNV   DP+KSM+ NQ S L  +       +SH+ P  R+
Sbjct: 286 HTNLIPNYTVKALIANWCESNNVKLPDPIKSMSFNQPSPLLVHVESIASRDSHVLPHLRE 345

Query: 174 NHPFARTNHVRSTSSLHENVLSS 242
           N P +  ++ RS  S   +++SS
Sbjct: 346 NQPLSPESN-RSAGSPGRSMISS 367