BLASTX nr result
ID: Coptis24_contig00035367
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035367 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su... 68 9e-10 ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group] g... 64 1e-08 gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japo... 64 1e-08 gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indi... 64 1e-08 ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 64 2e-08 >ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera] gi|296088521|emb|CBI37512.3| unnamed protein product [Vitis vinifera] Length = 1089 Score = 67.8 bits (164), Expect = 9e-10 Identities = 26/36 (72%), Positives = 30/36 (83%) Frame = -1 Query: 164 GHSVCCNVHEFEPYFYVSCPQEMGLDDVSRFHHIAQ 57 GHSVCCNVH FEPYFY+SCP MG DD+SRFH + + Sbjct: 125 GHSVCCNVHGFEPYFYISCPPGMGPDDISRFHQVLE 160 >ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group] gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit gi|9188570|dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group] gi|62734232|gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa Japonica Group] gi|77549018|gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza sativa Japonica Group] gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group] Length = 1105 Score = 64.3 bits (155), Expect = 1e-08 Identities = 25/32 (78%), Positives = 27/32 (84%) Frame = -1 Query: 164 GHSVCCNVHEFEPYFYVSCPQEMGLDDVSRFH 69 GHSVCC VH FEPYFY+SCP MG DD+SRFH Sbjct: 141 GHSVCCQVHGFEPYFYISCPMGMGPDDISRFH 172 >gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group] Length = 1100 Score = 64.3 bits (155), Expect = 1e-08 Identities = 25/32 (78%), Positives = 27/32 (84%) Frame = -1 Query: 164 GHSVCCNVHEFEPYFYVSCPQEMGLDDVSRFH 69 GHSVCC VH FEPYFY+SCP MG DD+SRFH Sbjct: 141 GHSVCCQVHGFEPYFYISCPMGMGPDDISRFH 172 >gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group] Length = 1087 Score = 64.3 bits (155), Expect = 1e-08 Identities = 25/32 (78%), Positives = 27/32 (84%) Frame = -1 Query: 164 GHSVCCNVHEFEPYFYVSCPQEMGLDDVSRFH 69 GHSVCC VH FEPYFY+SCP MG DD+SRFH Sbjct: 141 GHSVCCQVHGFEPYFYISCPMGMGPDDISRFH 172 >ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit-like [Cucumis sativus] Length = 573 Score = 63.5 bits (153), Expect = 2e-08 Identities = 25/37 (67%), Positives = 29/37 (78%) Frame = -1 Query: 164 GHSVCCNVHEFEPYFYVSCPQEMGLDDVSRFHHIAQA 54 GHSVCC+VH FEPYFY+SCP MG DD+S FH +A Sbjct: 122 GHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEA 158