BLASTX nr result

ID: Coptis24_contig00035352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035352
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275647.1| PREDICTED: sex determination protein tassels...    93   2e-17
emb|CAN62844.1| hypothetical protein VITISV_021186 [Vitis vinifera]    93   2e-17
ref|XP_002449566.1| hypothetical protein SORBIDRAFT_05g019130 [S...    92   4e-17
gb|AFW60867.1| hypothetical protein ZEAMMB73_404342 [Zea mays]         91   1e-16
ref|NP_001169021.1| uncharacterized protein LOC100382854 [Zea ma...    91   1e-16

>ref|XP_002275647.1| PREDICTED: sex determination protein tasselseed-2 [Vitis vinifera]
           gi|296082281|emb|CBI21286.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/57 (77%), Positives = 47/57 (82%)
 Frame = -2

Query: 351 VNGLGELKGATCEEIDIAHAAVYLASNEAKYVNGHNLVVDGGFTSFKQLRLPMPDHL 181
           VNGLGELKG  CEE DIAHAA+YLAS+EAKYV GHNLVVDGGFT FK L  P PD +
Sbjct: 243 VNGLGELKGTKCEESDIAHAALYLASDEAKYVTGHNLVVDGGFTCFKTLGFPSPDQV 299


>emb|CAN62844.1| hypothetical protein VITISV_021186 [Vitis vinifera]
          Length = 332

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/57 (77%), Positives = 47/57 (82%)
 Frame = -2

Query: 351 VNGLGELKGATCEEIDIAHAAVYLASNEAKYVNGHNLVVDGGFTSFKQLRLPMPDHL 181
           VNGLGELKG  CEE DIAHAA+YLAS+EAKYV GHNLVVDGGFT FK L  P PD +
Sbjct: 275 VNGLGELKGTKCEESDIAHAALYLASDEAKYVTGHNLVVDGGFTCFKTLGFPSPDQV 331


>ref|XP_002449566.1| hypothetical protein SORBIDRAFT_05g019130 [Sorghum bicolor]
           gi|241935409|gb|EES08554.1| hypothetical protein
           SORBIDRAFT_05g019130 [Sorghum bicolor]
          Length = 319

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = -2

Query: 351 VNGLGELKGATCEEIDIAHAAVYLASNEAKYVNGHNLVVDGGFTSFKQLRLPMP 190
           + GLGELKGATCE +DIA AAVYLAS++AKYV+GHNLVVDGGFTS+K++ LP P
Sbjct: 261 IRGLGELKGATCEAVDIARAAVYLASDDAKYVSGHNLVVDGGFTSYKRMNLPFP 314


>gb|AFW60867.1| hypothetical protein ZEAMMB73_404342 [Zea mays]
          Length = 322

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -2

Query: 351 VNGLGELKGATCEEIDIAHAAVYLASNEAKYVNGHNLVVDGGFTSFKQLRLPMP 190
           V GLGEL+GATCE +DIA AAVYLAS++AKYV+GHNLVVDGGFTS+K + LP P
Sbjct: 264 VRGLGELRGATCEAVDIARAAVYLASDDAKYVSGHNLVVDGGFTSYKHMNLPFP 317


>ref|NP_001169021.1| uncharacterized protein LOC100382854 [Zea mays]
           gi|223974481|gb|ACN31428.1| unknown [Zea mays]
          Length = 322

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -2

Query: 351 VNGLGELKGATCEEIDIAHAAVYLASNEAKYVNGHNLVVDGGFTSFKQLRLPMP 190
           V GLGEL+GATCE +DIA AAVYLAS++AKYV+GHNLVVDGGFTS+K + LP P
Sbjct: 264 VRGLGELRGATCEAVDIARAAVYLASDDAKYVSGHNLVVDGGFTSYKHMNLPFP 317


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