BLASTX nr result

ID: Coptis24_contig00035350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035350
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316070.1| predicted protein [Populus trichocarpa] gi|2...   171   6e-41
ref|XP_002519296.1| protein transporter, putative [Ricinus commu...   165   4e-39
ref|XP_003632007.1| PREDICTED: uncharacterized protein LOC100256...   154   6e-36
emb|CBI25993.3| unnamed protein product [Vitis vinifera]              154   6e-36
ref|XP_003529487.1| PREDICTED: uncharacterized protein LOC100783...   153   1e-35

>ref|XP_002316070.1| predicted protein [Populus trichocarpa] gi|222865110|gb|EEF02241.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  171 bits (433), Expect = 6e-41
 Identities = 90/132 (68%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3   ELEDLSIFDCIKEVVHLCRKCDLENFFVTRXXXXXXXXXXXXXXXEGIGAFVTEAITQYP 182
           ELEDLS+FDCIKEVV L  K  LENF V +               EGIGAFV+EAI+QYP
Sbjct: 34  ELEDLSVFDCIKEVVTLHSKYGLENFIVRQMPSPPAPPVPQQSIIEGIGAFVSEAISQYP 93

Query: 183 SATWRACSCVHLLLHIPNISLETE-VQQSLVVAFSGAALSRFREIQSKPSALWKPLLLVI 359
           SATWRA SCVH+LL++P+ S ETE V+QSLV AFS AA SRFREIQSKP +LWKPLLLVI
Sbjct: 94  SATWRASSCVHMLLNVPSYSFETENVKQSLVTAFSQAAFSRFREIQSKPCSLWKPLLLVI 153

Query: 360 SSCYLCNPDIVE 395
           SSCYLC PD VE
Sbjct: 154 SSCYLCYPDTVE 165


>ref|XP_002519296.1| protein transporter, putative [Ricinus communis]
            gi|223541611|gb|EEF43160.1| protein transporter, putative
            [Ricinus communis]
          Length = 965

 Score =  165 bits (417), Expect = 4e-39
 Identities = 84/131 (64%), Positives = 95/131 (72%)
 Frame = +3

Query: 3    ELEDLSIFDCIKEVVHLCRKCDLENFFVTRXXXXXXXXXXXXXXXEGIGAFVTEAITQYP 182
            E EDLSIFDCIKEVV+L  K  L+NF   +               EGIGAFV+EAI QYP
Sbjct: 794  ESEDLSIFDCIKEVVNLNSKYGLKNFITRQMPSPPSPPVPPQSIIEGIGAFVSEAILQYP 853

Query: 183  SATWRACSCVHLLLHIPNISLETEVQQSLVVAFSGAALSRFREIQSKPSALWKPLLLVIS 362
            SATWRACSCVH+LLH+P    ETEV+QSL ++F  AA S F+EIQSKP +LWKPLLLVIS
Sbjct: 854  SATWRACSCVHMLLHVPCYPTETEVKQSLTISFCQAAFSHFKEIQSKPCSLWKPLLLVIS 913

Query: 363  SCYLCNPDIVE 395
            SCYL  PDIVE
Sbjct: 914  SCYLSCPDIVE 924


>ref|XP_003632007.1| PREDICTED: uncharacterized protein LOC100256169 [Vitis vinifera]
          Length = 824

 Score =  154 bits (390), Expect = 6e-36
 Identities = 81/132 (61%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3   ELEDLSIFDCIKEVVHLCRKCDLENFFVTRXXXXXXXXXXXXXXXEGIGAFVTEAITQYP 182
           E+EDLSIF+CIKEVV+L  K  L++F V                 EGIGAFV+ AI +YP
Sbjct: 487 EMEDLSIFECIKEVVNLHGKFGLKDFIVRGLPSPPVPPVPQRSIIEGIGAFVSTAIAEYP 546

Query: 183 SATWRACSCVHLLLHIPNISLETE-VQQSLVVAFSGAALSRFREIQSKPSALWKPLLLVI 359
           SATWRA SCVH+LLH+P+ S E E V+QSLV+AFS AA SRF+ I SKP ++WKPLLL I
Sbjct: 547 SATWRASSCVHVLLHVPSYSSEVESVKQSLVIAFSEAASSRFKAICSKPCSMWKPLLLTI 606

Query: 360 SSCYLCNPDIVE 395
           SSCYLC PDIVE
Sbjct: 607 SSCYLCYPDIVE 618


>emb|CBI25993.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  154 bits (390), Expect = 6e-36
 Identities = 81/132 (61%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3    ELEDLSIFDCIKEVVHLCRKCDLENFFVTRXXXXXXXXXXXXXXXEGIGAFVTEAITQYP 182
            E+EDLSIF+CIKEVV+L  K  L++F V                 EGIGAFV+ AI +YP
Sbjct: 710  EMEDLSIFECIKEVVNLHGKFGLKDFIVRGLPSPPVPPVPQRSIIEGIGAFVSTAIAEYP 769

Query: 183  SATWRACSCVHLLLHIPNISLETE-VQQSLVVAFSGAALSRFREIQSKPSALWKPLLLVI 359
            SATWRA SCVH+LLH+P+ S E E V+QSLV+AFS AA SRF+ I SKP ++WKPLLL I
Sbjct: 770  SATWRASSCVHVLLHVPSYSSEVESVKQSLVIAFSEAASSRFKAICSKPCSMWKPLLLTI 829

Query: 360  SSCYLCNPDIVE 395
            SSCYLC PDIVE
Sbjct: 830  SSCYLCYPDIVE 841


>ref|XP_003529487.1| PREDICTED: uncharacterized protein LOC100783023 [Glycine max]
          Length = 1094

 Score =  153 bits (387), Expect = 1e-35
 Identities = 82/132 (62%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3    ELEDLSIFDCIKEVVHLCRKCDLENFFVTRXXXXXXXXXXXXXXXEGIGAFVTEAITQYP 182
            E EDLSIF+ IKE+V+L  +  L+NF V                 EGIGAF++EAI QYP
Sbjct: 757  ESEDLSIFEVIKEIVNLDCRYKLKNFVVKEMPPPPAPPVPERSIVEGIGAFISEAIKQYP 816

Query: 183  SATWRACSCVHLLLHIPNISLETE-VQQSLVVAFSGAALSRFREIQSKPSALWKPLLLVI 359
            SAT RACSCVH+LLH P  S ETE V+QSL + FS AA SRF E+QS PSALWKPLLL I
Sbjct: 817  SATLRACSCVHILLHCPTYSPETEGVKQSLAIVFSQAAFSRFIEVQSTPSALWKPLLLAI 876

Query: 360  SSCYLCNPDIVE 395
            SSCYLC PDIVE
Sbjct: 877  SSCYLCYPDIVE 888


Top