BLASTX nr result

ID: Coptis24_contig00035349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035349
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21958.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002279857.1| PREDICTED: uncharacterized protein LOC100255...   151   5e-35
ref|XP_002525125.1| conserved hypothetical protein [Ricinus comm...   144   1e-32
ref|XP_002327316.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_003543309.1| PREDICTED: uncharacterized protein LOC100813...   141   5e-32

>emb|CBI21958.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  151 bits (382), Expect = 5e-35
 Identities = 66/97 (68%), Positives = 78/97 (80%)
 Frame = +3

Query: 18  NSGVSYRWDYMQEGNWLYKDMNRLITFYKGMTTWARWVNLYIDPAKTKVFLLGISPTHYE 197
           ++G +  WDY+QEGN LYKDMNRLI +YKG+TTWARWVN+ +DP+KTKVF  GISPTHYE
Sbjct: 95  HTGRTQPWDYVQEGNKLYKDMNRLIAYYKGLTTWARWVNINVDPSKTKVFFQGISPTHYE 154

Query: 198 GKDWNNPLRNCKGEMLPVSGSRYPVGLPPEAFVVNKV 308
           GKDWN P R+C GEM P  G+ YP G+P  A VVNKV
Sbjct: 155 GKDWNQPSRSCDGEMQPYFGASYPAGIPMAAVVVNKV 191


>ref|XP_002279857.1| PREDICTED: uncharacterized protein LOC100255693 [Vitis vinifera]
          Length = 364

 Score =  151 bits (382), Expect = 5e-35
 Identities = 66/97 (68%), Positives = 78/97 (80%)
 Frame = +3

Query: 18  NSGVSYRWDYMQEGNWLYKDMNRLITFYKGMTTWARWVNLYIDPAKTKVFLLGISPTHYE 197
           ++G +  WDY+QEGN LYKDMNRLI +YKG+TTWARWVN+ +DP+KTKVF  GISPTHYE
Sbjct: 208 HTGRTQPWDYVQEGNKLYKDMNRLIAYYKGLTTWARWVNINVDPSKTKVFFQGISPTHYE 267

Query: 198 GKDWNNPLRNCKGEMLPVSGSRYPVGLPPEAFVVNKV 308
           GKDWN P R+C GEM P  G+ YP G+P  A VVNKV
Sbjct: 268 GKDWNQPSRSCDGEMQPYFGASYPAGIPMAAVVVNKV 304


>ref|XP_002525125.1| conserved hypothetical protein [Ricinus communis]
           gi|223535584|gb|EEF37252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 350

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/97 (65%), Positives = 73/97 (75%)
 Frame = +3

Query: 18  NSGVSYRWDYMQEGNWLYKDMNRLITFYKGMTTWARWVNLYIDPAKTKVFLLGISPTHYE 197
           ++G +  WDYMQEGN LYKDMNRL+ +YKG+TTWARWVN  +DP+KTKVF  GISPTHYE
Sbjct: 196 HTGRTQPWDYMQEGNKLYKDMNRLVAYYKGLTTWARWVNRNVDPSKTKVFFQGISPTHYE 255

Query: 198 GKDWNNPLRNCKGEMLPVSGSRYPVGLPPEAFVVNKV 308
           GKDWN P R+C  E  P  G RYP G P    VVNKV
Sbjct: 256 GKDWNEPTRSCAAETQPFFGIRYPAGTPLAWVVVNKV 292


>ref|XP_002327316.1| predicted protein [Populus trichocarpa] gi|222835686|gb|EEE74121.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  143 bits (361), Expect = 1e-32
 Identities = 63/97 (64%), Positives = 75/97 (77%)
 Frame = +3

Query: 18  NSGVSYRWDYMQEGNWLYKDMNRLITFYKGMTTWARWVNLYIDPAKTKVFLLGISPTHYE 197
           ++G S  WDY+QEGN LYK+MNRLI FYKG+TTWARWVN Y+DP++TKVF   ISPTHYE
Sbjct: 213 HTGRSQPWDYIQEGNKLYKNMNRLIAFYKGLTTWARWVNRYVDPSRTKVFFQDISPTHYE 272

Query: 198 GKDWNNPLRNCKGEMLPVSGSRYPVGLPPEAFVVNKV 308
           G+DW  P ++C GE  P  G+RYP G P E  VVNKV
Sbjct: 273 GRDWKEPSKSCAGETQPFFGTRYPAGTPLEWVVVNKV 309


>ref|XP_003543309.1| PREDICTED: uncharacterized protein LOC100813837 [Glycine max]
          Length = 369

 Score =  141 bits (356), Expect = 5e-32
 Identities = 61/97 (62%), Positives = 74/97 (76%)
 Frame = +3

Query: 18  NSGVSYRWDYMQEGNWLYKDMNRLITFYKGMTTWARWVNLYIDPAKTKVFLLGISPTHYE 197
           ++G S  WDY+QEGN LYKDMNRLI FYKG+TTWARWVN+ ++PA++KVF LGISP HYE
Sbjct: 215 HTGSSQPWDYIQEGNKLYKDMNRLILFYKGLTTWARWVNINVNPAQSKVFFLGISPVHYE 274

Query: 198 GKDWNNPLRNCKGEMLPVSGSRYPVGLPPEAFVVNKV 308
           GKDWN P ++C  E  P  G +YP G P    +VNKV
Sbjct: 275 GKDWNQPAKSCMSETKPFFGLKYPAGTPMALVIVNKV 311


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