BLASTX nr result
ID: Coptis24_contig00035334
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035334 (361 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40 ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containi... 152 2e-35 ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containi... 140 8e-32 gb|ADE75673.1| unknown [Picea sitchensis] 137 1e-30 gb|ADE77588.1| unknown [Picea sitchensis] 135 3e-30 >ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Vitis vinifera] gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera] Length = 637 Score = 169 bits (428), Expect = 2e-40 Identities = 79/119 (66%), Positives = 92/119 (77%) Frame = -3 Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180 AF+FI++MP +PD G+W LL ACKIH + I ECVA HL LEP+TAV YV MANIYA+ Sbjct: 515 AFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYAS 574 Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNLAL 3 G+W VA +R MMK NK KSPG+SLVQ NGK H FTVEDR HPEGLLIY+ L+NLAL Sbjct: 575 AGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLAL 633 >ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Cucumis sativus] gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Cucumis sativus] Length = 651 Score = 152 bits (385), Expect = 2e-35 Identities = 71/119 (59%), Positives = 92/119 (77%) Frame = -3 Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180 A + I+DMPM+PD G+WGALLGACKIHN +EI E V+ +L L+P+ AVS+V MANIYA+ Sbjct: 513 ALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYAS 572 Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNLAL 3 G W +VA +R M+ N++RKSPG+S+VQ NG H F VEDRSH + LLIY+ L NLA+ Sbjct: 573 VGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAM 631 >ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Glycine max] Length = 651 Score = 140 bits (354), Expect = 8e-32 Identities = 67/117 (57%), Positives = 84/117 (71%) Frame = -3 Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180 A + IK MP EPD+G+W ALL ACK+H +E+ + V++ L LEP+ AV YV MANIYA+ Sbjct: 514 ALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYAS 573 Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNL 9 W+ VA +R MK +VRKSPGQS++Q NGK FTVEDR HPE L IYD+LD L Sbjct: 574 AEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFTVEDRDHPETLYIYDMLDGL 630 >gb|ADE75673.1| unknown [Picea sitchensis] Length = 246 Score = 137 bits (344), Expect = 1e-30 Identities = 64/117 (54%), Positives = 84/117 (71%) Frame = -3 Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180 A FI +MP+EPD GVWGALLGACKIH IE+AECVA+HL +LE + YV + NIYAA Sbjct: 30 AHDFISNMPLEPDDGVWGALLGACKIHLNIELAECVAEHLFKLESENVGYYVVLCNIYAA 89 Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNL 9 G+W DVAKVR +M +RK+ S ++ N +H+F +EDRSHP+ IY +L++L Sbjct: 90 TGKWDDVAKVRTLMNEKGLRKTAECSFIEVNNSVHTFHMEDRSHPQSQGIYLMLESL 146 >gb|ADE77588.1| unknown [Picea sitchensis] Length = 312 Score = 135 bits (341), Expect = 3e-30 Identities = 67/118 (56%), Positives = 84/118 (71%) Frame = -3 Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180 A+ FI+ MP+EP A VWGA LG+C+IH IE+ E VA+ LL L+P A YV ++NIYAA Sbjct: 96 AWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAA 155 Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNLA 6 G W DVAKVR MMK V+KSPG SL++ N K+HSF V D SHP+ IY +L+ LA Sbjct: 156 AGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLETLA 213