BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035334
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
gb|ADE75673.1| unknown [Picea sitchensis]                             137   1e-30
gb|ADE77588.1| unknown [Picea sitchensis]                             135   3e-30

>ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
           gi|296082485|emb|CBI21490.3| unnamed protein product
           [Vitis vinifera]
          Length = 637

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/119 (66%), Positives = 92/119 (77%)
 Frame = -3

Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180
           AF+FI++MP +PD G+W  LL ACKIH  + I ECVA HL  LEP+TAV YV MANIYA+
Sbjct: 515 AFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYAS 574

Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNLAL 3
            G+W  VA +R MMK NK  KSPG+SLVQ NGK H FTVEDR HPEGLLIY+ L+NLAL
Sbjct: 575 AGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLAL 633


>ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
           gi|449516723|ref|XP_004165396.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/119 (59%), Positives = 92/119 (77%)
 Frame = -3

Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180
           A + I+DMPM+PD G+WGALLGACKIHN +EI E V+ +L  L+P+ AVS+V MANIYA+
Sbjct: 513 ALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYAS 572

Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNLAL 3
            G W +VA +R  M+ N++RKSPG+S+VQ NG  H F VEDRSH + LLIY+ L NLA+
Sbjct: 573 VGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAM 631


>ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/117 (57%), Positives = 84/117 (71%)
 Frame = -3

Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180
           A + IK MP EPD+G+W ALL ACK+H  +E+ + V++ L  LEP+ AV YV MANIYA+
Sbjct: 514 ALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYAS 573

Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNL 9
              W+ VA +R  MK  +VRKSPGQS++Q NGK   FTVEDR HPE L IYD+LD L
Sbjct: 574 AEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFTVEDRDHPETLYIYDMLDGL 630


>gb|ADE75673.1| unknown [Picea sitchensis]
          Length = 246

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/117 (54%), Positives = 84/117 (71%)
 Frame = -3

Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180
           A  FI +MP+EPD GVWGALLGACKIH  IE+AECVA+HL +LE +    YV + NIYAA
Sbjct: 30  AHDFISNMPLEPDDGVWGALLGACKIHLNIELAECVAEHLFKLESENVGYYVVLCNIYAA 89

Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNL 9
            G+W DVAKVR +M    +RK+   S ++ N  +H+F +EDRSHP+   IY +L++L
Sbjct: 90  TGKWDDVAKVRTLMNEKGLRKTAECSFIEVNNSVHTFHMEDRSHPQSQGIYLMLESL 146


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/118 (56%), Positives = 84/118 (71%)
 Frame = -3

Query: 359 AFQFIKDMPMEPDAGVWGALLGACKIHNAIEIAECVADHLLRLEPKTAVSYVTMANIYAA 180
           A+ FI+ MP+EP A VWGA LG+C+IH  IE+ E VA+ LL L+P  A  YV ++NIYAA
Sbjct: 96  AWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAA 155

Query: 179 EGEWKDVAKVRAMMKGNKVRKSPGQSLVQANGKIHSFTVEDRSHPEGLLIYDVLDNLA 6
            G W DVAKVR MMK   V+KSPG SL++ N K+HSF V D SHP+   IY +L+ LA
Sbjct: 156 AGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLETLA 213