BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035328
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...   166   2e-39
emb|CBI15551.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]   166   2e-39

>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/88 (85%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   TKMVLHDVEEEEKEHMLKYHSEKIAVAYGLLTVPAGRPIRVIKNLRVCEDCHNAIKYISK 181
           TK+VLHDVEEEEKEHMLKYHSEK+AVA+G+LT+PAGRPIRV+KNLRVC+DCHNAIK+ISK
Sbjct: 676 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISK 735

Query: 182 IVGRLIILRDSNCFHHFNCGSCSCGDYW 265
           IVGRLIILRDS+ FHHF+ G CSCGDYW
Sbjct: 736 IVGRLIILRDSHRFHHFSEGICSCGDYW 763


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525106|gb|AET05560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/88 (85%), Positives = 84/88 (95%)
 Frame = +2

Query: 2   TKMVLHDVEEEEKEHMLKYHSEKIAVAYGLLTVPAGRPIRVIKNLRVCEDCHNAIKYISK 181
           TK+VLHDVEEEEKEHMLKYHSEK+AVA+G+LT+P GRPIRV+KNLRVCEDCH+AIK+ISK
Sbjct: 679 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISK 738

Query: 182 IVGRLIILRDSNCFHHFNCGSCSCGDYW 265
           IVGRLIILRDS+ FHHFN G CSCGDYW
Sbjct: 739 IVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +2

Query: 29   EEEKEHMLKYHSEKIAVAYGLLTVPAGRPIRVIKN-LRVCEDCHNAIKYISKIVGRLIIL 205
            EEEKE  LKY SE +A A G+LT+P GRP RV+K  + VCEDC +AIK++SKIVGRLI L
Sbjct: 904  EEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITL 963

Query: 206  RDSNCFHHFNCGSCSCGDYW 265
            RDS   H FN   CSCG+YW
Sbjct: 964  RDS---HRFNESICSCGEYW 980


>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/88 (85%), Positives = 83/88 (94%)
 Frame = +2

Query: 2   TKMVLHDVEEEEKEHMLKYHSEKIAVAYGLLTVPAGRPIRVIKNLRVCEDCHNAIKYISK 181
           TK+VLHDVEEEEK HMLKYHSEK+AVA+G+L +PAGRPIRVIKNLRVCEDCHNA+K+ISK
Sbjct: 598 TKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISK 657

Query: 182 IVGRLIILRDSNCFHHFNCGSCSCGDYW 265
           IVGRLIILRDS+ FHHFN G CSCGDYW
Sbjct: 658 IVGRLIILRDSHRFHHFNGGQCSCGDYW 685


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/88 (85%), Positives = 83/88 (94%)
 Frame = +2

Query: 2   TKMVLHDVEEEEKEHMLKYHSEKIAVAYGLLTVPAGRPIRVIKNLRVCEDCHNAIKYISK 181
           TK+VLHDVEEEEK HMLKYHSEK+AVA+G+L +PAGRPIRVIKNLRVCEDCHNA+K+ISK
Sbjct: 679 TKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISK 738

Query: 182 IVGRLIILRDSNCFHHFNCGSCSCGDYW 265
           IVGRLIILRDS+ FHHFN G CSCGDYW
Sbjct: 739 IVGRLIILRDSHRFHHFNGGQCSCGDYW 766


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/88 (85%), Positives = 84/88 (95%)
 Frame = +2

Query: 2   TKMVLHDVEEEEKEHMLKYHSEKIAVAYGLLTVPAGRPIRVIKNLRVCEDCHNAIKYISK 181
           TK+VLHDVEEEEKEHMLKYHSEK+AVA+G+LT+P GRPIRV+KNLRVCEDCH+AIK+ISK
Sbjct: 679 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISK 738

Query: 182 IVGRLIILRDSNCFHHFNCGSCSCGDYW 265
           IVGRLIILRDS+ FHHFN G CSCGDYW
Sbjct: 739 IVGRLIILRDSHRFHHFNEGFCSCGDYW 766