BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035322
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   159   9e-45
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   159   9e-45
emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]   158   7e-44
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]   154   2e-43
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   153   1e-42

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  159 bits (401), Expect(2) = 9e-45
 Identities = 76/103 (73%), Positives = 86/103 (83%)
 Frame = -2

Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217
           LP+ LPPMRDIQH IDL+PG+ +PN   YRM+  EHAEL+RQV +LL KGFIRESLSPC 
Sbjct: 601 LPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG 660

Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88
           VPALL PKKDG+WRMCVDSRAINKIT KY FPI  LDD+LD +
Sbjct: 661 VPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMM 703



 Score = 46.6 bits (109), Expect(2) = 9e-45
 Identities = 18/27 (66%), Positives = 25/27 (92%)
 Frame = -1

Query: 82  GAAVFTKLDLKSGYYQIRIRIGDEWKS 2
           G+ +F+K+DL+SGY+QIRIR GDEWK+
Sbjct: 705 GSVIFSKIDLRSGYHQIRIRPGDEWKT 731


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  159 bits (401), Expect(2) = 9e-45
 Identities = 76/103 (73%), Positives = 86/103 (83%)
 Frame = -2

Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217
           LP+ LPPMRDIQH IDL+PG+ +PN   YRM+  EHAEL+RQV +LL KGFIRESLSPC 
Sbjct: 560 LPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG 619

Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88
           VPALL PKKDG+WRMCVDSRAINKIT KY FPI  LDD+LD +
Sbjct: 620 VPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMM 662



 Score = 46.6 bits (109), Expect(2) = 9e-45
 Identities = 18/27 (66%), Positives = 25/27 (92%)
 Frame = -1

Query: 82  GAAVFTKLDLKSGYYQIRIRIGDEWKS 2
           G+ +F+K+DL+SGY+QIRIR GDEWK+
Sbjct: 664 GSVIFSKIDLRSGYHQIRIRPGDEWKT 690


>emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]
          Length = 1499

 Score =  158 bits (400), Expect(2) = 7e-44
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = -2

Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217
           LP+ LPPMRD+QH IDL+PG+ +PN   YRM+  EHAEL+RQV +LL KGFIRESLSPC 
Sbjct: 534 LPNELPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG 593

Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88
           VPALL PKKDG+WRMCVDSRAINKIT KY FPI  LDD+LD +
Sbjct: 594 VPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMM 636



 Score = 43.9 bits (102), Expect(2) = 7e-44
 Identities = 17/27 (62%), Positives = 24/27 (88%)
 Frame = -1

Query: 82  GAAVFTKLDLKSGYYQIRIRIGDEWKS 2
           G+ +F+K+DL+SGY+QI IR GDEWK+
Sbjct: 638 GSVIFSKIDLRSGYHQICIRSGDEWKT 664


>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
          Length = 1323

 Score =  154 bits (390), Expect(2) = 2e-43
 Identities = 73/103 (70%), Positives = 84/103 (81%)
 Frame = -2

Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217
           LP+ LPPMRD+QH IDL+PG+ +PN   YRM+  EH EL+RQV +LL K FIRESLSPC 
Sbjct: 489 LPNQLPPMRDVQHAIDLIPGASLPNLXAYRMNPTEHXELKRQVDELLTKCFIRESLSPCG 548

Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88
           VP LL PKKDG+WRMCVDSRAINKITTKY FPI  LDD+LD +
Sbjct: 549 VPTLLTPKKDGSWRMCVDSRAINKITTKYQFPIPRLDDMLDMM 591



 Score = 46.6 bits (109), Expect(2) = 2e-43
 Identities = 17/27 (62%), Positives = 25/27 (92%)
 Frame = -1

Query: 82  GAAVFTKLDLKSGYYQIRIRIGDEWKS 2
           G+ +F+K+DL+SGY+QIR R+GDEWK+
Sbjct: 593 GSVIFSKIDLRSGYHQIRXRLGDEWKT 619


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  153 bits (387), Expect(2) = 1e-42
 Identities = 73/102 (71%), Positives = 83/102 (81%)
 Frame = -2

Query: 393 PDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCVV 214
           P GLPP+R I+HQID VPGS++PNR  YR + +E  ELQRQV +LL KGF+RES+SPC V
Sbjct: 680 PKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSV 739

Query: 213 PALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88
           P LLVPKKDGTWRMCVD RAINKIT KY  PI  LDD+LDQL
Sbjct: 740 PVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQL 781



 Score = 44.7 bits (104), Expect(2) = 1e-42
 Identities = 17/27 (62%), Positives = 24/27 (88%)
 Frame = -1

Query: 82  GAAVFTKLDLKSGYYQIRIRIGDEWKS 2
           G+ +F+K+DLKSGY+QIR+  GDEWK+
Sbjct: 783 GSKIFSKIDLKSGYHQIRLNPGDEWKT 809