BLASTX nr result
ID: Coptis24_contig00035322
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035322 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 159 9e-45 emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 159 9e-45 emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera] 158 7e-44 emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 154 2e-43 gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 153 1e-42 >emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] Length = 1521 Score = 159 bits (401), Expect(2) = 9e-45 Identities = 76/103 (73%), Positives = 86/103 (83%) Frame = -2 Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217 LP+ LPPMRDIQH IDL+PG+ +PN YRM+ EHAEL+RQV +LL KGFIRESLSPC Sbjct: 601 LPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG 660 Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88 VPALL PKKDG+WRMCVDSRAINKIT KY FPI LDD+LD + Sbjct: 661 VPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMM 703 Score = 46.6 bits (109), Expect(2) = 9e-45 Identities = 18/27 (66%), Positives = 25/27 (92%) Frame = -1 Query: 82 GAAVFTKLDLKSGYYQIRIRIGDEWKS 2 G+ +F+K+DL+SGY+QIRIR GDEWK+ Sbjct: 705 GSVIFSKIDLRSGYHQIRIRPGDEWKT 731 >emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] Length = 1392 Score = 159 bits (401), Expect(2) = 9e-45 Identities = 76/103 (73%), Positives = 86/103 (83%) Frame = -2 Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217 LP+ LPPMRDIQH IDL+PG+ +PN YRM+ EHAEL+RQV +LL KGFIRESLSPC Sbjct: 560 LPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG 619 Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88 VPALL PKKDG+WRMCVDSRAINKIT KY FPI LDD+LD + Sbjct: 620 VPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMM 662 Score = 46.6 bits (109), Expect(2) = 9e-45 Identities = 18/27 (66%), Positives = 25/27 (92%) Frame = -1 Query: 82 GAAVFTKLDLKSGYYQIRIRIGDEWKS 2 G+ +F+K+DL+SGY+QIRIR GDEWK+ Sbjct: 664 GSVIFSKIDLRSGYHQIRIRPGDEWKT 690 >emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera] Length = 1499 Score = 158 bits (400), Expect(2) = 7e-44 Identities = 75/103 (72%), Positives = 86/103 (83%) Frame = -2 Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217 LP+ LPPMRD+QH IDL+PG+ +PN YRM+ EHAEL+RQV +LL KGFIRESLSPC Sbjct: 534 LPNELPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG 593 Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88 VPALL PKKDG+WRMCVDSRAINKIT KY FPI LDD+LD + Sbjct: 594 VPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMM 636 Score = 43.9 bits (102), Expect(2) = 7e-44 Identities = 17/27 (62%), Positives = 24/27 (88%) Frame = -1 Query: 82 GAAVFTKLDLKSGYYQIRIRIGDEWKS 2 G+ +F+K+DL+SGY+QI IR GDEWK+ Sbjct: 638 GSVIFSKIDLRSGYHQICIRSGDEWKT 664 >emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] Length = 1323 Score = 154 bits (390), Expect(2) = 2e-43 Identities = 73/103 (70%), Positives = 84/103 (81%) Frame = -2 Query: 396 LPDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCV 217 LP+ LPPMRD+QH IDL+PG+ +PN YRM+ EH EL+RQV +LL K FIRESLSPC Sbjct: 489 LPNQLPPMRDVQHAIDLIPGASLPNLXAYRMNPTEHXELKRQVDELLTKCFIRESLSPCG 548 Query: 216 VPALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88 VP LL PKKDG+WRMCVDSRAINKITTKY FPI LDD+LD + Sbjct: 549 VPTLLTPKKDGSWRMCVDSRAINKITTKYQFPIPRLDDMLDMM 591 Score = 46.6 bits (109), Expect(2) = 2e-43 Identities = 17/27 (62%), Positives = 25/27 (92%) Frame = -1 Query: 82 GAAVFTKLDLKSGYYQIRIRIGDEWKS 2 G+ +F+K+DL+SGY+QIR R+GDEWK+ Sbjct: 593 GSVIFSKIDLRSGYHQIRXRLGDEWKT 619 >gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1588 Score = 153 bits (387), Expect(2) = 1e-42 Identities = 73/102 (71%), Positives = 83/102 (81%) Frame = -2 Query: 393 PDGLPPMRDIQHQIDLVPGSKMPNRLHYRMSLKEHAELQRQVTDLLAKGFIRESLSPCVV 214 P GLPP+R I+HQID VPGS++PNR YR + +E ELQRQV +LL KGF+RES+SPC V Sbjct: 680 PKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSV 739 Query: 213 PALLVPKKDGTWRMCVDSRAINKITTKYHFPILWLDDLLDQL 88 P LLVPKKDGTWRMCVD RAINKIT KY PI LDD+LDQL Sbjct: 740 PVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQL 781 Score = 44.7 bits (104), Expect(2) = 1e-42 Identities = 17/27 (62%), Positives = 24/27 (88%) Frame = -1 Query: 82 GAAVFTKLDLKSGYYQIRIRIGDEWKS 2 G+ +F+K+DLKSGY+QIR+ GDEWK+ Sbjct: 783 GSKIFSKIDLKSGYHQIRLNPGDEWKT 809