BLASTX nr result

ID: Coptis24_contig00035321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035321
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. l...    60   2e-07

>ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 608

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 3/49 (6%)
 Frame = -1

Query: 139 FSTSSL---SNPTPKPLLITNPLYNLLPQTQNPNKIVNLICSHLKHNNN 2
           FS+SS+    N  PKP+L  NPLYNLLPQTQNPNKIV++ICS L H ++
Sbjct: 11  FSSSSIVPRCNNIPKPIL--NPLYNLLPQTQNPNKIVDVICSTLNHRDH 57


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