BLASTX nr result

ID: Coptis24_contig00035318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035318
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG27431.1| QM-like protein [Elaeis guineensis]                     74   1e-20
ref|XP_003600557.1| 60S ribosomal protein L10 [Medicago truncatu...    74   1e-20
ref|XP_004163738.1| PREDICTED: 60S ribosomal protein L10-like [C...    72   2e-20
gb|ACU13769.1| unknown [Glycine max]                                   72   2e-20
gb|AFK38655.1| unknown [Lotus japonicus]                               72   2e-20

>gb|AAG27431.1| QM-like protein [Elaeis guineensis]
          Length = 224

 Score = 73.6 bits (179), Expect(2) = 1e-20
 Identities = 39/50 (78%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -3

Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10
           HVLRI KMLSC  ADR QTGMR AF KP  TCARV IG V LSVRCKDGN
Sbjct: 95  HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVMIGQVLLSVRCKDGN 144



 Score = 51.2 bits (121), Expect(2) = 1e-20
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -1

Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156
           AARIACN YMAK+AG+D FHLRV+VHP
Sbjct: 67  AARIACNKYMAKYAGKDAFHLRVRVHP 93


>ref|XP_003600557.1| 60S ribosomal protein L10 [Medicago truncatula]
           gi|355489605|gb|AES70808.1| 60S ribosomal protein L10
           [Medicago truncatula]
          Length = 218

 Score = 73.6 bits (179), Expect(2) = 1e-20
 Identities = 39/50 (78%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -3

Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10
           HVLRI KMLSC  ADR QTGMR AF KPL TCARV IG V LSVRCK GN
Sbjct: 95  HVLRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKSGN 144



 Score = 51.2 bits (121), Expect(2) = 1e-20
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -1

Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156
           AARIACN YM+KFAG+D FHLRV+VHP
Sbjct: 67  AARIACNKYMSKFAGKDTFHLRVRVHP 93


>ref|XP_004163738.1| PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus]
          Length = 256

 Score = 71.6 bits (174), Expect(2) = 2e-20
 Identities = 38/50 (76%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -3

Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10
           HVLRI KMLSC  ADR QTGMR AF KP  TCARV IG V LSVRCKD N
Sbjct: 142 HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSN 191



 Score = 52.4 bits (124), Expect(2) = 2e-20
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156
           AARIACN YMAKFAG+D FHLRV+VHP
Sbjct: 114 AARIACNKYMAKFAGKDAFHLRVRVHP 140


>gb|ACU13769.1| unknown [Glycine max]
          Length = 230

 Score = 71.6 bits (174), Expect(2) = 2e-20
 Identities = 38/50 (76%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -3

Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10
           HVLRI KMLSC  ADR QTGMR AF KP  TCARV IG V LSVRCKD N
Sbjct: 95  HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSN 144



 Score = 52.4 bits (124), Expect(2) = 2e-20
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156
           AARIACN YMAKFAG+D FHLRV+VHP
Sbjct: 67  AARIACNKYMAKFAGKDAFHLRVRVHP 93


>gb|AFK38655.1| unknown [Lotus japonicus]
          Length = 223

 Score = 71.6 bits (174), Expect(2) = 2e-20
 Identities = 38/50 (76%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -3

Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10
           HVLRI KMLSC  ADR QTGMR AF KP  TCARV IG V LSVRCKD N
Sbjct: 95  HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSN 144



 Score = 52.4 bits (124), Expect(2) = 2e-20
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156
           AARIACN YMAKFAG+D FHLRV+VHP
Sbjct: 67  AARIACNKYMAKFAGKDAFHLRVRVHP 93


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