BLASTX nr result
ID: Coptis24_contig00035318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035318 (236 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG27431.1| QM-like protein [Elaeis guineensis] 74 1e-20 ref|XP_003600557.1| 60S ribosomal protein L10 [Medicago truncatu... 74 1e-20 ref|XP_004163738.1| PREDICTED: 60S ribosomal protein L10-like [C... 72 2e-20 gb|ACU13769.1| unknown [Glycine max] 72 2e-20 gb|AFK38655.1| unknown [Lotus japonicus] 72 2e-20 >gb|AAG27431.1| QM-like protein [Elaeis guineensis] Length = 224 Score = 73.6 bits (179), Expect(2) = 1e-20 Identities = 39/50 (78%), Positives = 39/50 (78%), Gaps = 1/50 (2%) Frame = -3 Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10 HVLRI KMLSC ADR QTGMR AF KP TCARV IG V LSVRCKDGN Sbjct: 95 HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVMIGQVLLSVRCKDGN 144 Score = 51.2 bits (121), Expect(2) = 1e-20 Identities = 22/27 (81%), Positives = 25/27 (92%) Frame = -1 Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156 AARIACN YMAK+AG+D FHLRV+VHP Sbjct: 67 AARIACNKYMAKYAGKDAFHLRVRVHP 93 >ref|XP_003600557.1| 60S ribosomal protein L10 [Medicago truncatula] gi|355489605|gb|AES70808.1| 60S ribosomal protein L10 [Medicago truncatula] Length = 218 Score = 73.6 bits (179), Expect(2) = 1e-20 Identities = 39/50 (78%), Positives = 39/50 (78%), Gaps = 1/50 (2%) Frame = -3 Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10 HVLRI KMLSC ADR QTGMR AF KPL TCARV IG V LSVRCK GN Sbjct: 95 HVLRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKSGN 144 Score = 51.2 bits (121), Expect(2) = 1e-20 Identities = 22/27 (81%), Positives = 25/27 (92%) Frame = -1 Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156 AARIACN YM+KFAG+D FHLRV+VHP Sbjct: 67 AARIACNKYMSKFAGKDTFHLRVRVHP 93 >ref|XP_004163738.1| PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus] Length = 256 Score = 71.6 bits (174), Expect(2) = 2e-20 Identities = 38/50 (76%), Positives = 38/50 (76%), Gaps = 1/50 (2%) Frame = -3 Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10 HVLRI KMLSC ADR QTGMR AF KP TCARV IG V LSVRCKD N Sbjct: 142 HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSN 191 Score = 52.4 bits (124), Expect(2) = 2e-20 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = -1 Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156 AARIACN YMAKFAG+D FHLRV+VHP Sbjct: 114 AARIACNKYMAKFAGKDAFHLRVRVHP 140 >gb|ACU13769.1| unknown [Glycine max] Length = 230 Score = 71.6 bits (174), Expect(2) = 2e-20 Identities = 38/50 (76%), Positives = 38/50 (76%), Gaps = 1/50 (2%) Frame = -3 Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10 HVLRI KMLSC ADR QTGMR AF KP TCARV IG V LSVRCKD N Sbjct: 95 HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSN 144 Score = 52.4 bits (124), Expect(2) = 2e-20 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = -1 Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156 AARIACN YMAKFAG+D FHLRV+VHP Sbjct: 67 AARIACNKYMAKFAGKDAFHLRVRVHP 93 >gb|AFK38655.1| unknown [Lotus japonicus] Length = 223 Score = 71.6 bits (174), Expect(2) = 2e-20 Identities = 38/50 (76%), Positives = 38/50 (76%), Gaps = 1/50 (2%) Frame = -3 Query: 156 HVLRIYKMLSCVEADRPQTGMRSAFRKPLRTCARVCIGHV-LSVRCKDGN 10 HVLRI KMLSC ADR QTGMR AF KP TCARV IG V LSVRCKD N Sbjct: 95 HVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSN 144 Score = 52.4 bits (124), Expect(2) = 2e-20 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = -1 Query: 236 AARIACN*YMAKFAGEDVFHLRVKVHP 156 AARIACN YMAKFAG+D FHLRV+VHP Sbjct: 67 AARIACNKYMAKFAGKDAFHLRVRVHP 93