BLASTX nr result

ID: Coptis24_contig00035310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035310
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263848.2| PREDICTED: probable glycosyltransferase At5g...   149   3e-34
ref|XP_002531944.1| catalytic, putative [Ricinus communis] gi|22...   147   1e-33
ref|XP_003542647.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   146   1e-33
emb|CAN76361.1| hypothetical protein VITISV_035438 [Vitis vinifera]   145   3e-33
ref|XP_004139407.1| PREDICTED: probable glycosyltransferase At3g...   143   2e-32

>ref|XP_002263848.2| PREDICTED: probable glycosyltransferase At5g20260-like [Vitis
           vinifera] gi|296084516|emb|CBI25537.3| unnamed protein
           product [Vitis vinifera]
          Length = 477

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/95 (71%), Positives = 82/95 (86%)
 Frame = -2

Query: 297 EAIHAGCVPVLISKDYIPPFSDVLDWSQFSVQIPIEKIPDIKTILQAIPDNKYIKMQKRV 118
           EAIHAGCVPV+IS +Y  PF+DVLDWSQFS+QIP+ KIP+IKTIL  I  NKY+KMQ+RV
Sbjct: 381 EAIHAGCVPVIISNNYSLPFNDVLDWSQFSIQIPVAKIPEIKTILLGISKNKYLKMQERV 440

Query: 117 TRVQIHFELNRPSKRFDVIHMLLHSVWLRRLNLGL 13
            RV+ HF LNRP++ FD+IHM+LHS+WLRRLN GL
Sbjct: 441 LRVRRHFVLNRPARPFDIIHMILHSLWLRRLNFGL 475


>ref|XP_002531944.1| catalytic, putative [Ricinus communis] gi|223528390|gb|EEF30426.1|
           catalytic, putative [Ricinus communis]
          Length = 363

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/95 (70%), Positives = 84/95 (88%)
 Frame = -2

Query: 297 EAIHAGCVPVLISKDYIPPFSDVLDWSQFSVQIPIEKIPDIKTILQAIPDNKYIKMQKRV 118
           E+I+AGC+PV+IS  Y  PFSDVLDWSQ SVQIP+EKIP+IKTIL+ + ++KY++MQKRV
Sbjct: 269 ESIYAGCIPVIISDHYNLPFSDVLDWSQISVQIPVEKIPEIKTILKGVSNDKYLRMQKRV 328

Query: 117 TRVQIHFELNRPSKRFDVIHMLLHSVWLRRLNLGL 13
            RVQ HFE+NRPSK FDV+HM+LHSVWLRRL++ L
Sbjct: 329 RRVQRHFEINRPSKPFDVLHMVLHSVWLRRLDIRL 363


>ref|XP_003542647.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 340

 Score =  146 bits (369), Expect = 1e-33
 Identities = 66/95 (69%), Positives = 82/95 (86%)
 Frame = -2

Query: 297 EAIHAGCVPVLISKDYIPPFSDVLDWSQFSVQIPIEKIPDIKTILQAIPDNKYIKMQKRV 118
           EAI+AGCVPVLIS  Y PPF+DVL+WSQFSV+IP+EKIP+IKTILQ++   KY+K+Q  V
Sbjct: 242 EAIYAGCVPVLISSSYSPPFTDVLNWSQFSVEIPVEKIPEIKTILQSVSPKKYLKLQMNV 301

Query: 117 TRVQIHFELNRPSKRFDVIHMLLHSVWLRRLNLGL 13
            RVQ HF +NRP+K FD++HM+LHS+WLRRLNL L
Sbjct: 302 LRVQRHFTINRPAKPFDLMHMILHSIWLRRLNLKL 336


>emb|CAN76361.1| hypothetical protein VITISV_035438 [Vitis vinifera]
          Length = 459

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/95 (71%), Positives = 80/95 (84%)
 Frame = -2

Query: 297 EAIHAGCVPVLISKDYIPPFSDVLDWSQFSVQIPIEKIPDIKTILQAIPDNKYIKMQKRV 118
           EAIHAGCVPV+IS  Y  PF+DVLDWSQFS+QIP  KIP+IKTIL  I  NKY+KMQ+RV
Sbjct: 363 EAIHAGCVPVIISNXYSLPFNDVLDWSQFSIQIPEAKIPEIKTILLGISKNKYLKMQERV 422

Query: 117 TRVQIHFELNRPSKRFDVIHMLLHSVWLRRLNLGL 13
            RV+ HF LNRP++ FD+IHM+LHS+WLRRLN GL
Sbjct: 423 LRVRRHFVLNRPARPFDIIHMILHSLWLRRLNFGL 457


>ref|XP_004139407.1| PREDICTED: probable glycosyltransferase At3g42180-like [Cucumis
           sativus] gi|449494024|ref|XP_004159425.1| PREDICTED:
           probable glycosyltransferase At3g42180-like [Cucumis
           sativus]
          Length = 447

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/95 (68%), Positives = 83/95 (87%)
 Frame = -2

Query: 297 EAIHAGCVPVLISKDYIPPFSDVLDWSQFSVQIPIEKIPDIKTILQAIPDNKYIKMQKRV 118
           EAI+ GCVPV+IS +Y  PFSDVLDWS+FSVQIP+++IP+IKTIL+AI + KY+K+ K V
Sbjct: 351 EAIYGGCVPVIISDNYSLPFSDVLDWSRFSVQIPVQRIPEIKTILKAISEEKYLKLYKGV 410

Query: 117 TRVQIHFELNRPSKRFDVIHMLLHSVWLRRLNLGL 13
            +V+ HF++NRP+K FDVIHMLLHS+WLRRLN GL
Sbjct: 411 IKVKRHFKINRPAKPFDVIHMLLHSLWLRRLNFGL 445


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