BLASTX nr result

ID: Coptis24_contig00035307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035307
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37043.3| unnamed protein product [Vitis vinifera]              200   9e-50
ref|XP_002273575.1| PREDICTED: probable cellulose synthase A cat...   200   9e-50
ref|XP_003532664.1| PREDICTED: cellulose synthase A catalytic su...   190   1e-46
gb|ACS68190.1| cellulose synthase 1.2 catalytic subunit [Brassic...   190   1e-46
ref|NP_194967.1| cellulose synthase A catalytic subunit 1 [UDP-f...   189   3e-46

>emb|CBI37043.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  200 bits (509), Expect = 9e-50
 Identities = 89/139 (64%), Positives = 110/139 (79%)
 Frame = +1

Query: 1   VIANTVLSVLSVNYPSEKICCYVSDDKAXXXXXXXXXXXCEYAKKWVPFCKKFSIEPRSP 180
           VI+NT+LS+LSV+YP+EK+ CYVSD+ A           C++A+KWVPFCKKF IEP SP
Sbjct: 169 VISNTILSILSVDYPAEKVSCYVSDEGAARLTLETLSLTCDFARKWVPFCKKFQIEPPSP 228

Query: 181 ESYFTQKADHLKYNIFPTFPKERRLIKRHYEEFKVRINSLEAKFKNVPSYGWTMKDGCPW 360
           ESYF+QK DHLKYN +PTF KERRL+KR YE+FK +IN L  KF++VPS GWTMKDG PW
Sbjct: 229 ESYFSQKVDHLKYNPYPTFSKERRLMKRRYEDFKAQINGLITKFQDVPSEGWTMKDGTPW 288

Query: 361 PGNNTGNHPGMIQILLGAG 417
           PGN+  NH GM+QI++G G
Sbjct: 289 PGNDIKNHLGMMQIIMGRG 307


>ref|XP_002273575.1| PREDICTED: probable cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Vitis vinifera]
          Length = 887

 Score =  200 bits (509), Expect = 9e-50
 Identities = 89/139 (64%), Positives = 110/139 (79%)
 Frame = +1

Query: 1   VIANTVLSVLSVNYPSEKICCYVSDDKAXXXXXXXXXXXCEYAKKWVPFCKKFSIEPRSP 180
           VI+NT+LS+LSV+YP+EK+ CYVSD+ A           C++A+KWVPFCKKF IEP SP
Sbjct: 194 VISNTILSILSVDYPAEKVSCYVSDEGAARLTLETLSLTCDFARKWVPFCKKFQIEPPSP 253

Query: 181 ESYFTQKADHLKYNIFPTFPKERRLIKRHYEEFKVRINSLEAKFKNVPSYGWTMKDGCPW 360
           ESYF+QK DHLKYN +PTF KERRL+KR YE+FK +IN L  KF++VPS GWTMKDG PW
Sbjct: 254 ESYFSQKVDHLKYNPYPTFSKERRLMKRRYEDFKAQINGLITKFQDVPSEGWTMKDGTPW 313

Query: 361 PGNNTGNHPGMIQILLGAG 417
           PGN+  NH GM+QI++G G
Sbjct: 314 PGNDIKNHLGMMQIIMGRG 332


>ref|XP_003532664.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Glycine max]
          Length = 1034

 Score =  190 bits (482), Expect = 1e-46
 Identities = 85/139 (61%), Positives = 106/139 (76%)
 Frame = +1

Query: 1   VIANTVLSVLSVNYPSEKICCYVSDDKAXXXXXXXXXXXCEYAKKWVPFCKKFSIEPRSP 180
           + ANTVLS+L+V+YP EK+CCYVSDD A            E+A++WVPFCKK+SIEPR+P
Sbjct: 306 ITANTVLSILAVDYPVEKVCCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYSIEPRAP 365

Query: 181 ESYFTQKADHLKYNIFPTFPKERRLIKRHYEEFKVRINSLEAKFKNVPSYGWTMKDGCPW 360
           E YF+QK D+LK  + PTF KERR +KR YEEFKV+IN+L AK +  P  GW M+DG PW
Sbjct: 366 EFYFSQKIDYLKDKVHPTFVKERRAMKREYEEFKVKINALVAKAQKKPEEGWVMQDGTPW 425

Query: 361 PGNNTGNHPGMIQILLGAG 417
           PGNNT +HPGMIQ+ LG+G
Sbjct: 426 PGNNTRDHPGMIQVYLGSG 444


>gb|ACS68190.1| cellulose synthase 1.2 catalytic subunit [Brassica napus]
          Length = 1083

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/137 (64%), Positives = 104/137 (75%)
 Frame = +1

Query: 1   VIANTVLSVLSVNYPSEKICCYVSDDKAXXXXXXXXXXXCEYAKKWVPFCKKFSIEPRSP 180
           V ANTVLS+L+V+YP +K+ CYVSDD A            E+AKKWVPFCKKFSIEPR+P
Sbjct: 371 VTANTVLSILAVDYPVDKVACYVSDDGAAMLTFESLSETAEFAKKWVPFCKKFSIEPRAP 430

Query: 181 ESYFTQKADHLKYNIFPTFPKERRLIKRHYEEFKVRINSLEAKFKNVPSYGWTMKDGCPW 360
           E YF QK D+LK  I P+F KERR +KR YEEFKVRIN+L AK + +P  GWTM+DG PW
Sbjct: 431 EFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPW 490

Query: 361 PGNNTGNHPGMIQILLG 411
           PGNNT +HPGMIQ+ LG
Sbjct: 491 PGNNTRDHPGMIQVFLG 507


>ref|NP_194967.1| cellulose synthase A catalytic subunit 1 [UDP-forming] [Arabidopsis
           thaliana] gi|73917709|sp|O48946.1|CESA1_ARATH RecName:
           Full=Cellulose synthase A catalytic subunit 1
           [UDP-forming]; Short=AtCesA1; AltName: Full=Protein
           RADIALLY SWOLLEN 1; Short=AtRSW1
           gi|2827139|gb|AAC39334.1| cellulose synthase catalytic
           subunit [Arabidopsis thaliana]
           gi|4049343|emb|CAA22568.1| cellulose synthase catalytic
           subunit (RSW1) [Arabidopsis thaliana]
           gi|7270145|emb|CAB79958.1| cellulose synthase catalytic
           subunit (RSW1) [Arabidopsis thaliana]
           gi|30794043|gb|AAP40467.1| putative cellulose synthase
           catalytic subunit (RSW1) [Arabidopsis thaliana]
           gi|110740603|dbj|BAE98406.1| cellulose synthase
           catalytic subunit [Arabidopsis thaliana]
           gi|332660653|gb|AEE86053.1| cellulose synthase A
           catalytic subunit 1 [UDP-forming] [Arabidopsis thaliana]
          Length = 1081

 Score =  189 bits (479), Expect = 3e-46
 Identities = 87/137 (63%), Positives = 104/137 (75%)
 Frame = +1

Query: 1   VIANTVLSVLSVNYPSEKICCYVSDDKAXXXXXXXXXXXCEYAKKWVPFCKKFSIEPRSP 180
           V ANTVLS+LSV+YP +K+ CYVSDD +            E+AKKWVPFCKKF+IEPR+P
Sbjct: 370 VTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAP 429

Query: 181 ESYFTQKADHLKYNIFPTFPKERRLIKRHYEEFKVRINSLEAKFKNVPSYGWTMKDGCPW 360
           E YF QK D+LK  I P+F KERR +KR YEEFKVRIN+L AK + +P  GWTM+DG PW
Sbjct: 430 EFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPW 489

Query: 361 PGNNTGNHPGMIQILLG 411
           PGNNT +HPGMIQ+ LG
Sbjct: 490 PGNNTRDHPGMIQVFLG 506


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