BLASTX nr result

ID: Coptis24_contig00035299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035299
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05904.1| IMP dehydrogenase/GMP reductase, related [Medicag...    61   8e-08
ref|XP_003615067.1| hypothetical protein MTR_5g063260 [Medicago ...    59   3e-07
ref|XP_003605668.1| hypothetical protein MTR_4g035630 [Medicago ...    58   7e-07
ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago ...    57   2e-06
ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago ...    56   3e-06

>gb|ABN05904.1| IMP dehydrogenase/GMP reductase, related [Medicago truncatula]
          Length = 387

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -1

Query: 240 ELPMPEKMGDYPAITIPEKAYEKGMQFCKHCLVGIIDLTK--VPIERVRILTKLL--WQP 73
           +LP P   GD  +I IPE  YE+G++ CK+ L G I   K   P+  V +  KL   W+ 
Sbjct: 50  QLPKPVIKGDLSSIEIPEDEYEEGLEACKYNLHGRIIWPKGSTPLTVVALRKKLFAAWKD 109

Query: 72  TGEWLITPIGKGYLFLKFSNVED 4
            G W ++ IGKGY    FSNVED
Sbjct: 110 PGRWGVSFIGKGYYEFCFSNVED 132


>ref|XP_003615067.1| hypothetical protein MTR_5g063260 [Medicago truncatula]
           gi|355516402|gb|AES98025.1| hypothetical protein
           MTR_5g063260 [Medicago truncatula]
          Length = 532

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -1

Query: 240 ELPMPEKMGDYPAITIPEKAYEKGMQFCKHCLVGIIDLTK--VPIERVRILTKL--LWQP 73
           +LP P + GD  AI+IP+  YE GM+ CK+ L   I   K   P+  V +  KL   W+ 
Sbjct: 51  QLPKPSRKGDNFAISIPDDEYEMGMEGCKYNLHARILWPKGSTPLTVVALRAKLQPAWKN 110

Query: 72  TGEWLITPIGKGYLFLKFSNVED 4
            G W IT IGKG+    FS++ED
Sbjct: 111 LGRWGITSIGKGFYEFIFSSIED 133


>ref|XP_003605668.1| hypothetical protein MTR_4g035630 [Medicago truncatula]
           gi|355506723|gb|AES87865.1| hypothetical protein
           MTR_4g035630 [Medicago truncatula]
          Length = 512

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = -1

Query: 237 LPMPEKMGDYPAITIPEKAYEKGMQFCKHCLVGIIDLTK----VPIERVRILTKLLWQPT 70
           LP P   GD  AI IPE  Y  G   CK  L G I   K    V ++ +R    +LW+  
Sbjct: 36  LPQPCMKGDRLAIEIPEDEYIAGFDECKFNLHGRIIWPKGSNPVTVDSLRNRLSMLWKSI 95

Query: 69  GEWLITPIGKGYLFLKFSNVED 4
           G+W IT IGKGY    FS++ED
Sbjct: 96  GKWGITSIGKGYYEFTFSSLED 117


>ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago truncatula]
           gi|355515779|gb|AES97402.1| hypothetical protein
           MTR_5g053720 [Medicago truncatula]
          Length = 524

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
 Frame = -1

Query: 237 LPMPEKMGDYPAITIPEKAYEKGMQFCKHCLVGIIDLTK----VPIERVRILTKLLWQPT 70
           LP P   G+  +ITI +K YEKG++ CKH L G + L+K       + + +  +  W+ +
Sbjct: 51  LPKPLIRGESVSITILQKIYEKGLEICKHNLRGRLVLSKGDKPYTTKDIHLKLQKQWKTS 110

Query: 69  GEWLITPIGKGYLFLKFSN 13
           GEW + P+G+G+    FS+
Sbjct: 111 GEWSMRPLGRGFFEFTFSS 129


>ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago truncatula]
           gi|355485440|gb|AES66643.1| hypothetical protein
           MTR_2g076760 [Medicago truncatula]
          Length = 513

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
 Frame = -1

Query: 237 LPMPEKMGDYPAITIPEKAYEKGMQFCKHCLVGIIDLTK----VPIERVRILTKLLWQPT 70
           LP P   G+  +ITI ++ YEKG++ CKH L G + L+K       + + +  +  W+ T
Sbjct: 50  LPTPLIRGESVSITITQQIYEKGLEVCKHNLRGRLVLSKGDKPYTTKDIHLKLQKQWKTT 109

Query: 69  GEWLITPIGKGYLFLKF-SNVE 7
           GEW + P+G+G+    F SN++
Sbjct: 110 GEWSMRPLGRGFFEFTFASNID 131


Top