BLASTX nr result

ID: Coptis24_contig00035272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035272
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEW10539.1| maturase K [Coptis deltoidea]                          243   9e-63
gb|AEK21942.2| maturase K, partial [Coptis chinensis]                 243   9e-63
gb|AEK21943.2| maturase K, partial [Coptis chinensis]                 243   9e-63
gb|AEK21944.2| maturase K, partial [Coptis chinensis] gi|3610730...   243   9e-63
gb|AEK21946.2| maturase K, partial [Coptis deltoidea]                 243   9e-63

>gb|AEW10539.1| maturase K [Coptis deltoidea]
          Length = 265

 Score =  243 bits (621), Expect = 9e-63
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = -3

Query: 350 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 171
           GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN
Sbjct: 120 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 179

Query: 170 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 3
           TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS
Sbjct: 180 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 235


>gb|AEK21942.2| maturase K, partial [Coptis chinensis]
          Length = 265

 Score =  243 bits (621), Expect = 9e-63
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = -3

Query: 350 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 171
           GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN
Sbjct: 120 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 179

Query: 170 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 3
           TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS
Sbjct: 180 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 235


>gb|AEK21943.2| maturase K, partial [Coptis chinensis]
          Length = 265

 Score =  243 bits (621), Expect = 9e-63
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = -3

Query: 350 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 171
           GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN
Sbjct: 120 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 179

Query: 170 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 3
           TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS
Sbjct: 180 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 235


>gb|AEK21944.2| maturase K, partial [Coptis chinensis] gi|361073057|gb|AEW10538.1|
           maturase K [Coptis chinensis var. brevisepala]
          Length = 265

 Score =  243 bits (621), Expect = 9e-63
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = -3

Query: 350 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 171
           GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN
Sbjct: 120 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 179

Query: 170 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 3
           TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS
Sbjct: 180 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 235


>gb|AEK21946.2| maturase K, partial [Coptis deltoidea]
          Length = 265

 Score =  243 bits (621), Expect = 9e-63
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = -3

Query: 350 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 171
           GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN
Sbjct: 120 GNSILSSNGTPLLMKKWKYYLVNLWECNFYFWSQPDRIHINQLSNNFIDFLGYLSSVRPN 179

Query: 170 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 3
           TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS
Sbjct: 180 TLVVRSQMLENGFFIDIAINKFDTIVPIIPMIRSLAKAKFCNLSGQPISKPTWADS 235


Top