BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035271
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CBI20513.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_004170791.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = +2

Query: 5   VPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALASCGQMSDALE 184
           V  TKH++MALINAY  CGQFEKAKQVVLDKG+P K++NE+KSV VSALA  GQ+SDA +
Sbjct: 566 VQVTKHVFMALINAYASCGQFEKAKQVVLDKGVPIKSLNEIKSVLVSALALHGQISDAFD 625

Query: 185 LYEEIKQAGCHLEPKAVISL 244
           +YEEIK +G +LEPKA+I L
Sbjct: 626 IYEEIKNSGFNLEPKAIILL 645


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = +2

Query: 5   VPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALASCGQMSDALE 184
           V  TKH++MALINAY  CGQFEKAKQVVLDKG+P K++NE+KSV VSALA  GQ+SDA +
Sbjct: 336 VQVTKHVFMALINAYASCGQFEKAKQVVLDKGVPIKSLNEIKSVLVSALALHGQISDAFD 395

Query: 185 LYEEIKQAGCHLEPKAVISL 244
           +YEEIK +G +LEPKA+I L
Sbjct: 396 IYEEIKNSGFNLEPKAIILL 415


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = +2

Query: 5   VPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALASCGQMSDALE 184
           +  +K I+MALINAY  CGQFEKAKQV+LDK  P K++NE++SV VSALAS GQM+DAL 
Sbjct: 501 IQVSKQIFMALINAYATCGQFEKAKQVLLDKEFPIKHLNEIRSVLVSALASHGQMTDALN 560

Query: 185 LYEEIKQAGCHLEPKAVISL 244
           LYEE+KQAG +LEPKAVISL
Sbjct: 561 LYEEMKQAGSNLEPKAVISL 580


>ref|XP_004170791.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Cucumis sativus]
          Length = 379

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = +2

Query: 5   VPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALASCGQMSDALE 184
           V ATKH++MALINAY   GQFEKAKQV+ D+G+P KN+NEV+ V VSALAS GQ +DAL+
Sbjct: 101 VQATKHVFMALINAYAAHGQFEKAKQVISDEGIPVKNLNEVRCVLVSALASNGQTADALK 160

Query: 185 LYEEIKQAGCHLEPKAVISL 244
           +Y+E+KQAGC L+ KAV SL
Sbjct: 161 IYDEMKQAGCDLDCKAVSSL 180


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = +2

Query: 5    VPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALASCGQMSDALE 184
            V ATKH++MALINAY   GQFEKAKQV+ D+G+P KN+NEV+ V VSALAS GQ +DAL+
Sbjct: 1017 VQATKHVFMALINAYAAHGQFEKAKQVISDEGIPVKNLNEVRCVLVSALASNGQTADALK 1076

Query: 185  LYEEIKQAGCHLEPKAVISL 244
            +Y+E+KQAGC L+ KAV SL
Sbjct: 1077 IYDEMKQAGCDLDCKAVSSL 1096