BLASTX nr result

ID: Coptis24_contig00035268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035268
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|NP_001057261.1| Os06g0239500 [Oryza sativa Japonica Group] g...   144   6e-33
gb|EAZ00312.1| hypothetical protein OsI_22329 [Oryza sativa Indi...   144   7e-33
ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transpor...   143   1e-32

>ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|222847991|gb|EEE85538.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/91 (78%), Positives = 82/91 (90%)
 Frame = -2

Query: 273 FWLLPQYILLGFSDVFTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIE 94
           FWLLPQYILLG SD+FTVVGMQEFFY+EVP RM+TMG+AL+ SVFGVGSFLSA+LIS++E
Sbjct: 423 FWLLPQYILLGISDIFTVVGMQEFFYSEVPVRMRTMGIALYTSVFGVGSFLSALLISLVE 482

Query: 93  FVTSDGQGRHSWFSDDMREAQLDKYYWFLAL 1
           + TS   G+ SWFSDDMREA+LDKYYW LAL
Sbjct: 483 YFTSSTGGK-SWFSDDMREARLDKYYWLLAL 512


>ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|222874578|gb|EEF11709.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/92 (78%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
 Frame = -2

Query: 273 FWLLPQYILLGFSDVFTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIE 94
           FWLLPQYILLG SD+FTVVGMQEFFY+EVP RM+TMG+AL+ SVFGVGSFLSA+LIS++E
Sbjct: 423 FWLLPQYILLGISDIFTVVGMQEFFYSEVPVRMRTMGIALYTSVFGVGSFLSALLISLVE 482

Query: 93  FVTSD-GQGRHSWFSDDMREAQLDKYYWFLAL 1
           + TS  G+GR SWFSDDMREA+ DKYYW LAL
Sbjct: 483 YFTSSRGKGR-SWFSDDMREARFDKYYWLLAL 513


>ref|NP_001057261.1| Os06g0239500 [Oryza sativa Japonica Group]
           gi|51535163|dbj|BAD37875.1| putative oligopeptide
           transporter [Oryza sativa Japonica Group]
           gi|51535827|dbj|BAD37912.1| putative oligopeptide
           transporter [Oryza sativa Japonica Group]
           gi|113595301|dbj|BAF19175.1| Os06g0239500 [Oryza sativa
           Japonica Group] gi|215694302|dbj|BAG89295.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 535

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/94 (73%), Positives = 80/94 (85%), Gaps = 3/94 (3%)
 Frame = -2

Query: 273 FWLLPQYILLGFSDVFTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIE 94
           FWLLPQY+LLG SDVFTVVGMQEFFYT+VPS M+T+G+AL+LSVFGVGSF+ A LI+ +E
Sbjct: 426 FWLLPQYVLLGVSDVFTVVGMQEFFYTQVPSAMRTVGIALYLSVFGVGSFVGAFLITALE 485

Query: 93  FVTSDGQG---RHSWFSDDMREAQLDKYYWFLAL 1
            VT+ G G    H WFSDD REA+LDKYYWFLAL
Sbjct: 486 MVTAGGGGGGHDHGWFSDDPREARLDKYYWFLAL 519


>gb|EAZ00312.1| hypothetical protein OsI_22329 [Oryza sativa Indica Group]
          Length = 563

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = -2

Query: 273 FWLLPQYILLGFSDVFTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIE 94
           FWLLPQY+LLG SDVFTVVGMQEFFYT+VPS M+T+G+AL+LSVFGVGSF+ A LI+ +E
Sbjct: 456 FWLLPQYVLLGVSDVFTVVGMQEFFYTQVPSAMRTVGIALYLSVFGVGSFVGAFLITALE 515

Query: 93  FVTSDGQGR-HSWFSDDMREAQLDKYYWFLAL 1
             T+ G G  H WFSDD REA+LDKYYWFLAL
Sbjct: 516 MATAAGGGHDHGWFSDDPREARLDKYYWFLAL 547


>ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Vitis vinifera]
          Length = 533

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/91 (75%), Positives = 78/91 (85%)
 Frame = -2

Query: 273 FWLLPQYILLGFSDVFTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIE 94
           FWLLPQYI+LG +D+FTVVGMQEFFY EVP RM+TMG+AL+ SVFGVGSF+SA LI +IE
Sbjct: 418 FWLLPQYIILGIADIFTVVGMQEFFYGEVPIRMRTMGIALYSSVFGVGSFMSAFLIWLIE 477

Query: 93  FVTSDGQGRHSWFSDDMREAQLDKYYWFLAL 1
             TS G GR  WFSDDMREA+LDKYYW LAL
Sbjct: 478 IFTSSG-GRQGWFSDDMREARLDKYYWLLAL 507


Top