BLASTX nr result

ID: Coptis24_contig00035255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035255
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313818.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002305412.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003631624.1| PREDICTED: uncharacterized protein LOC100855...   123   2e-26
ref|XP_002519109.1| conserved hypothetical protein [Ricinus comm...   118   8e-25
ref|XP_004145398.1| PREDICTED: uncharacterized protein LOC101205...   112   4e-23

>ref|XP_002313818.1| predicted protein [Populus trichocarpa] gi|222850226|gb|EEE87773.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  127 bits (320), Expect = 1e-27
 Identities = 66/122 (54%), Positives = 91/122 (74%), Gaps = 5/122 (4%)
 Frame = +2

Query: 83  MGVCASSQASKE----GGGISRPSTVKIIHADGRVQEFKQSIRAINILSQNPNSFLCSLE 250
           MG CAS Q +K+    GGG++ PST KIIH DGR+QEF+Q I+A +ILS NP SFLCS E
Sbjct: 1   MGNCASPQYTKKVGGGGGGLNWPSTAKIIHVDGRLQEFRQPIKASHILSLNPKSFLCSSE 60

Query: 251 SINLDSQMPRLAETEELQPGQIYFLLPLSQSHTHLSISDLCTLAIKASKALSKLEATSF- 427
           S+ +D  +P++ + EELQ GQ+YFL+PLS+S+  LS+ +LC LA KAS +L++ ++  F 
Sbjct: 61  SMYIDCHLPQVPDDEELQLGQLYFLVPLSKSNVPLSLQELCALASKASASLAQSDSMGFT 120

Query: 428 PN 433
           PN
Sbjct: 121 PN 122


>ref|XP_002305412.1| predicted protein [Populus trichocarpa] gi|222848376|gb|EEE85923.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/111 (54%), Positives = 86/111 (77%), Gaps = 2/111 (1%)
 Frame = +2

Query: 83  MGVCASSQASKE--GGGISRPSTVKIIHADGRVQEFKQSIRAINILSQNPNSFLCSLESI 256
           MG CAS Q  ++  GGG++R S  KI+H DGR+QEF++ I+A N+LS NPNSFLCS ES+
Sbjct: 1   MGNCASPQYKEKVAGGGLNRTSPAKIVHIDGRLQEFREPIKASNVLSLNPNSFLCSSESM 60

Query: 257 NLDSQMPRLAETEELQPGQIYFLLPLSQSHTHLSISDLCTLAIKASKALSK 409
            +D ++P++ + EELQ GQ+YFL+PLS+S T LS+ +LC LA KA+ +L++
Sbjct: 61  YIDRRLPQVPDDEELQVGQLYFLMPLSKSKTPLSLQELCALASKANASLAQ 111


>ref|XP_003631624.1| PREDICTED: uncharacterized protein LOC100855234 [Vitis vinifera]
          Length = 197

 Score =  123 bits (309), Expect = 2e-26
 Identities = 75/157 (47%), Positives = 100/157 (63%), Gaps = 11/157 (7%)
 Frame = +2

Query: 83  MGVCASSQA-SKEGGGISRPSTVKIIHADGRVQEFKQSIRAINILSQNPNSFLCSLESIN 259
           MG+C+SS   SK G  +S PST KIIH DG++QEF   I+A  ILSQNPN FLCS ES+ 
Sbjct: 1   MGICSSSHLMSKNGRCLSWPSTAKIIHLDGKLQEFLHPIQAGLILSQNPNCFLCSSESMF 60

Query: 260 LDSQMPRLAETEELQPGQIYFLLPLSQSHTHLSISDLCTLAIKASKALS---------KL 412
           ++S  P++ + EELQ GQIYFL+PLS+S + LS+ DLC LA+KAS A++         K 
Sbjct: 61  INSHAPQVPDKEELQLGQIYFLMPLSKSRSPLSLQDLCILAVKASAAIAHPNTAHLAIKT 120

Query: 413 EATSFPN-GHGVKLRPSLGGGSKIPARTDRIQMSSQL 520
              +FP+   G    PS  G +  PA T    +SS++
Sbjct: 121 GRAAFPSAAQGYCNMPSGLGINCQPAETAAAGLSSEM 157


>ref|XP_002519109.1| conserved hypothetical protein [Ricinus communis]
           gi|223541772|gb|EEF43320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score =  118 bits (296), Expect = 8e-25
 Identities = 63/112 (56%), Positives = 81/112 (72%), Gaps = 3/112 (2%)
 Frame = +2

Query: 83  MGVCASSQASKEGG---GISRPSTVKIIHADGRVQEFKQSIRAINILSQNPNSFLCSLES 253
           MG CAS Q +K+G       R ST KI+  DGR+QEFKQ I+A  +LSQNPN FLCS ES
Sbjct: 1   MGNCASPQYTKKGALALNYYRQSTAKIVDRDGRLQEFKQPIKANYVLSQNPNCFLCSSES 60

Query: 254 INLDSQMPRLAETEELQPGQIYFLLPLSQSHTHLSISDLCTLAIKASKALSK 409
           + ++S +  + + EELQ GQIYFL+PLS+SH  LS+ +LC LAIKAS AL++
Sbjct: 61  MYVNSPVSPVPDDEELQVGQIYFLMPLSKSHVLLSLQELCALAIKASAALAQ 112


>ref|XP_004145398.1| PREDICTED: uncharacterized protein LOC101205353 [Cucumis sativus]
           gi|449472582|ref|XP_004153638.1| PREDICTED:
           uncharacterized protein LOC101215081 [Cucumis sativus]
           gi|449502421|ref|XP_004161635.1| PREDICTED:
           uncharacterized protein LOC101223945 [Cucumis sativus]
          Length = 137

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/108 (51%), Positives = 79/108 (73%)
 Frame = +2

Query: 83  MGVCASSQASKEGGGISRPSTVKIIHADGRVQEFKQSIRAINILSQNPNSFLCSLESINL 262
           MGVCASSQ S      + P T KIIH DGR+QE +  ++A +IL+QNPN FLCS ES+ +
Sbjct: 1   MGVCASSQHSN-ASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKI 59

Query: 263 DSQMPRLAETEELQPGQIYFLLPLSQSHTHLSISDLCTLAIKASKALS 406
            S +P+++   EL+ G+IYFL+PL +SH  +S++DLC+LA KA+ AL+
Sbjct: 60  GSIVPQISSDRELELGEIYFLIPLKKSHLPISLTDLCSLAAKANVALA 107


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