BLASTX nr result
ID: Coptis24_contig00035248
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035248 (316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 73 3e-24 emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 74 6e-24 emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 74 6e-24 emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 74 6e-24 emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 71 3e-23 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 72.8 bits (177), Expect(2) = 3e-24 Identities = 33/49 (67%), Positives = 39/49 (79%) Frame = -3 Query: 161 GLPSIHCSDDVCEGCIYGKQHKLPFPVGKSWRATNPLEIVHADICGPTR 15 GLP+I D+CEGCIYGKQ + FPVGKSWRAT LE+VHAD+CGP + Sbjct: 468 GLPNIK-ELDLCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMK 515 Score = 63.9 bits (154), Expect(2) = 3e-24 Identities = 29/50 (58%), Positives = 39/50 (78%) Frame = -2 Query: 315 KNRMFPLDLSCLEECALVTNVKDDSRLWHLRYGHLHFNGLKLLNQKNMVL 166 +N+MFPLD+S + ALV K+++ LWHLRYGHL+ N LKLL QK+MV+ Sbjct: 418 QNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVI 467 >emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] Length = 1472 Score = 73.6 bits (179), Expect(2) = 6e-24 Identities = 35/53 (66%), Positives = 42/53 (79%) Frame = -3 Query: 161 GLPSIHCSDDVCEGCIYGKQHKLPFPVGKSWRATNPLEIVHADICGPTRTLSF 3 GLP I S +VCEGCIYGKQ K PFP G+S RA++ LEI+HAD+CGP +T SF Sbjct: 448 GLPKID-SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 499 Score = 62.0 bits (149), Expect(2) = 6e-24 Identities = 27/48 (56%), Positives = 37/48 (77%) Frame = -2 Query: 312 NRMFPLDLSCLEECALVTNVKDDSRLWHLRYGHLHFNGLKLLNQKNMV 169 N++FPL++S +E+ ALV +S LWHLRYGHL+ GLKLL++K MV Sbjct: 399 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMV 446 >emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] Length = 1274 Score = 73.6 bits (179), Expect(2) = 6e-24 Identities = 35/53 (66%), Positives = 42/53 (79%) Frame = -3 Query: 161 GLPSIHCSDDVCEGCIYGKQHKLPFPVGKSWRATNPLEIVHADICGPTRTLSF 3 GLP I S +VCEGCIYGKQ K PFP G+S RA++ LEI+HAD+CGP +T SF Sbjct: 463 GLPKID-SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 514 Score = 62.0 bits (149), Expect(2) = 6e-24 Identities = 27/48 (56%), Positives = 37/48 (77%) Frame = -2 Query: 312 NRMFPLDLSCLEECALVTNVKDDSRLWHLRYGHLHFNGLKLLNQKNMV 169 N++FPL++S +E+ ALV +S LWHLRYGHL+ GLKLL++K MV Sbjct: 414 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMV 461 >emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] Length = 1183 Score = 73.6 bits (179), Expect(2) = 6e-24 Identities = 35/53 (66%), Positives = 42/53 (79%) Frame = -3 Query: 161 GLPSIHCSDDVCEGCIYGKQHKLPFPVGKSWRATNPLEIVHADICGPTRTLSF 3 GLP I S +VCEGCIYGKQ K PFP G+S RA++ LEI+HAD+CGP +T SF Sbjct: 397 GLPKID-SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 448 Score = 62.0 bits (149), Expect(2) = 6e-24 Identities = 27/48 (56%), Positives = 37/48 (77%) Frame = -2 Query: 312 NRMFPLDLSCLEECALVTNVKDDSRLWHLRYGHLHFNGLKLLNQKNMV 169 N++FPL++S +E+ ALV +S LWHLRYGHL+ GLKLL++K MV Sbjct: 348 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMV 395 >emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] Length = 1430 Score = 71.2 bits (173), Expect(2) = 3e-23 Identities = 34/52 (65%), Positives = 41/52 (78%) Frame = -3 Query: 158 LPSIHCSDDVCEGCIYGKQHKLPFPVGKSWRATNPLEIVHADICGPTRTLSF 3 LP I S +VCEGCIYGKQ K PFP G+S RA++ LEI+HAD+CGP +T SF Sbjct: 575 LPKID-SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 625 Score = 62.0 bits (149), Expect(2) = 3e-23 Identities = 27/48 (56%), Positives = 37/48 (77%) Frame = -2 Query: 312 NRMFPLDLSCLEECALVTNVKDDSRLWHLRYGHLHFNGLKLLNQKNMV 169 N++FPL++S +E+ ALV +S LWHLRYGHL+ GLKLL++K MV Sbjct: 525 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMV 572