BLASTX nr result

ID: Coptis24_contig00035246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035246
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515331.1| conserved hypothetical protein [Ricinus comm...   139   4e-31
ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|2...   128   9e-28
ref|XP_002274279.1| PREDICTED: uncharacterized protein LOC100260...   120   2e-25
ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_003518929.1| PREDICTED: uncharacterized protein LOC100798...   114   2e-23

>ref|XP_002515331.1| conserved hypothetical protein [Ricinus communis]
           gi|223545811|gb|EEF47315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  139 bits (351), Expect = 4e-31
 Identities = 78/144 (54%), Positives = 100/144 (69%), Gaps = 12/144 (8%)
 Frame = -3

Query: 631 MEGVSAS------SWRRKKGYERLDGSGRRRKIPVVELGALGS-----SQKRRFSWKVKI 485
           MEGVSAS      S+ R++GY+RL+ SGRRR++  VELG   +     S++R+ SW++KI
Sbjct: 1   MEGVSASMYTKIRSYWRRRGYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIKI 60

Query: 484 KPKLRFFHLCSPKKFLTRLRDGYVNMMLGFANSRVFTNGFGYNGNETIDNGLRRAPVKEY 305
           KPKL+ F   SPKKF   LRD YVNMMLGFANSRV   G GY G   I     + P+KEY
Sbjct: 61  KPKLKIFKRASPKKFFVWLRDAYVNMMLGFANSRVI--GPGYGGGGGIATNFGKGPLKEY 118

Query: 304 DERLLIEIYKALMA-QGQLVSRDA 236
           DE+++I+IYK+L+A QGQLV  DA
Sbjct: 119 DEKMIIQIYKSLVAGQGQLVPHDA 142


>ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|222844467|gb|EEE82014.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  128 bits (322), Expect = 9e-28
 Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 10/142 (7%)
 Frame = -3

Query: 631 MEGVSASSWRRKK------GYERLDGSGRRRKIPVVELGALG--SSQKRRFSWKVKIKPK 476
           MEGVSA  + + K      GYER++GSGR R+   VE+G++   S ++RRF+W++K+KPK
Sbjct: 1   MEGVSARIFTKMKEYWSRRGYERINGSGRTRRSWPVEVGSVSTTSRRRRRFAWRIKVKPK 60

Query: 475 LRFFHLCSPKKFLTRLRDGYVNMMLGFANSRV-FTNGFGYNGNETIDNGLRRAPVKEYDE 299
           L+   + SPK+F   LRD YV MMLGFANSR   T G+G        +G+   P+KEYDE
Sbjct: 61  LKALKMSSPKRFFVWLRDAYVKMMLGFANSRARGTAGYG--------DGIGARPIKEYDE 112

Query: 298 RLLIEIYKAL-MAQGQLVSRDA 236
           +++IEIYK+L MAQGQLV RDA
Sbjct: 113 KMIIEIYKSLVMAQGQLVPRDA 134


>ref|XP_002274279.1| PREDICTED: uncharacterized protein LOC100260563 [Vitis vinifera]
           gi|147780786|emb|CAN70481.1| hypothetical protein
           VITISV_002249 [Vitis vinifera]
          Length = 143

 Score =  120 bits (302), Expect = 2e-25
 Identities = 76/138 (55%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
 Frame = -3

Query: 634 EMEGVSA-----SSWRRKKGYERLDGSGRRRKIPVVELGALGSSQKRRFSWKVKIKPKLR 470
           E+E VS      S W RK GY RL+GSGRR+    VEL  LGS+++RRF W+  IKPKLR
Sbjct: 2   EVESVSVFRGLRSFWARKGGYVRLNGSGRRKNR--VELARLGSNRRRRF-WR--IKPKLR 56

Query: 469 FFHLCSPKKFLTRLRDGYVNMMLGFANSRVFTNGFGYNGNETIDNGLRRAPVKEYDERLL 290
           FF + SPKKF   LRD YV MMLGFANSRV ++G+     + I  G  + P KEYDE+++
Sbjct: 57  FFRIPSPKKFFIWLRDAYVKMMLGFANSRVMSSGYSGVLGDGI-GGFGQRPPKEYDEKMI 115

Query: 289 IEIYKAL-MAQGQLVSRD 239
           IEIY++L MAQG L  RD
Sbjct: 116 IEIYRSLVMAQG-LAPRD 132


>ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|222861096|gb|EEE98638.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  118 bits (296), Expect = 1e-24
 Identities = 70/141 (49%), Positives = 94/141 (66%), Gaps = 9/141 (6%)
 Frame = -3

Query: 631 MEGVSASSWRRKKGY------ERLDGSGRRRKIPVVELGALGSSQKRR-FSWKVKIKPKL 473
           MEG+SAS + + KGY      ER++GSGR R+   VELG+  S+ + R FS ++KIKPKL
Sbjct: 1   MEGISASMYTKMKGYWSRRGYERINGSGRIRRKRPVELGSGSSTSRGRGFSLRIKIKPKL 60

Query: 472 RFFHLCSPKKFLTRLRDGYVNMMLGFANSR-VFTNGFGYNGNETIDNGLRRAPVKEYDER 296
           +   + SP+KF   LRD YV MMLG ANSR + T+G+G       D    R P+KEYDE+
Sbjct: 61  KILKMSSPRKFFVWLRDAYVKMMLGLANSRAIGTSGYG-------DAFGARRPIKEYDEK 113

Query: 295 LLIEIYKAL-MAQGQLVSRDA 236
           ++++IYK+L M QGQLV  DA
Sbjct: 114 MIVQIYKSLVMTQGQLVPHDA 134


>ref|XP_003518929.1| PREDICTED: uncharacterized protein LOC100798623 [Glycine max]
          Length = 152

 Score =  114 bits (285), Expect = 2e-23
 Identities = 69/147 (46%), Positives = 95/147 (64%), Gaps = 15/147 (10%)
 Frame = -3

Query: 631 MEGVSASSWR------RKKGYERLDGSGRRRKIPVVELGALGSSQKRRFSWKVKIKPKLR 470
           MEG++AS  R      R+KGY+RL+GSGRRR+  V ELG+  + + R + W++++ PK+R
Sbjct: 1   MEGITASVCRGVKEYWRRKGYKRLNGSGRRRRNRV-ELGSTRTGKGRFWRWRIRLAPKIR 59

Query: 469 FFHLCSPKKFLTRLRDGYVNMMLGFANSRVFT-----NGFG--YNGNETIDNGLRRAPVK 311
              + SPKK +  +RD YV MMLG ANSR+ T     +GFG    G +T   G  RAP K
Sbjct: 60  IRKIPSPKKMVLWVRDAYVRMMLGLANSRIMTVSASASGFGGTLAGADTSFAGFGRAPPK 119

Query: 310 EYDERLLIEIYKALMAQ--GQLVSRDA 236
           EYDE+ +I+IYK+L+    G LV RDA
Sbjct: 120 EYDEKTIIQIYKSLLMAHGGPLVPRDA 146


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