BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035244
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...    90   2e-16
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...    77   2e-12
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago trun...    70   2e-10
ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like...    69   3e-10

>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 6/80 (7%)
 Frame = -3

Query: 224 CDGKLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEG---RSMACAIVNGKML 54
           CD KLPK+NWSQH  AH+NFSCQ +F++SNFLYSL  QKP  EG     + C I + + L
Sbjct: 20  CDEKLPKINWSQHDKAHDNFSCQKKFLSSNFLYSLENQKPHSEGVMAMRLTCQIQSFQRL 79

Query: 53  QSPQ---AWKALSSFQVTKR 3
           QSPQ   AW ALS  Q++ R
Sbjct: 80  QSPQVEKAWHALSCLQISCR 99


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
 Frame = -3

Query: 218 GKLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEGR----SMACAIVNGKMLQ 51
           GK PK+NW +H  AH +FSCQ +F+ SNFL+ LP QKPS  G     ++AC + N + +Q
Sbjct: 76  GKCPKMNWLEHSKAHKDFSCQKKFLCSNFLFCLPEQKPSTTGSTDTGNLACQMQNLQRIQ 135

Query: 50  SPQ---AWKALSSFQVTKR 3
             Q   AW ALS+FQ++ R
Sbjct: 136 RSQVEKAWNALSNFQISCR 154


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
 Frame = -3

Query: 248 NKLSKDSSC-DGKLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEGRSMACAI 72
           N LS+   C D K PKVNW QH +A +N S   +F+++NFLYSL +QKP    R  +C +
Sbjct: 12  NNLSEGRKCEDEKQPKVNWLQHANALDNISSGRKFLSANFLYSLESQKPMSM-RLSSCDV 70

Query: 71  VNGKMLQSPQ---AWKALSSFQVTKR 3
            N + LQS Q   AW ALS+ Q++ R
Sbjct: 71  QNPQRLQSSQVEKAWHALSTLQISSR 96


>ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
           gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase
           Q1 [Medicago truncatula]
          Length = 1156

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
 Frame = -3

Query: 215 KLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEGRSMACAIVNGKMLQSPQ-- 42
           ++P+ NW +HV++HNNFS Q +F+TSNFL++LPT KP     +    +  G+ +QS Q  
Sbjct: 12  QIPQHNWLKHVNSHNNFSSQPQFLTSNFLFTLPTNKPIDRAATTTSIVRQGQNVQSSQRA 71

Query: 41  ----AWKALSSFQVTKR 3
               AW ALS  Q++ R
Sbjct: 72  QVDKAWSALSRLQLSSR 88


>ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
           distachyon]
          Length = 1126

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
 Frame = -3

Query: 260 LPSGNKLSKDSSCDGKLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEG---- 93
           +   NKL+  SSC+ KLP+VNW  H SA  + S +++F++S+FL+SLPTQ+P+ E     
Sbjct: 1   MQGSNKLNAGSSCNDKLPRVNWPHHASAIQSSSSKDDFLSSSFLFSLPTQRPNPEANCNS 60

Query: 92  ----RSMACAIVNGKMLQSP 45
               RS AC I   + LQ P
Sbjct: 61  MISLRSAACKIQGPERLQVP 80