BLASTX nr result
ID: Coptis24_contig00035228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00035228
(730 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera] 80 2e-32
emb|CAN62611.1| hypothetical protein VITISV_033248 [Vitis vinifera] 76 9e-31
emb|CAN79792.1| hypothetical protein VITISV_021866 [Vitis vinifera] 80 3e-30
emb|CAN66642.1| hypothetical protein VITISV_008302 [Vitis vinifera] 75 4e-30
emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera] 76 6e-30
>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
Length = 1201
Score = 80.1 bits (196), Expect(3) = 2e-32
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Frame = +1
Query: 115 YDHVNWEFLDYMLRRMGFGEKYRRWISLCIT---LNCPCGWFTEGYFRSERGLRQEDPIS 285
YDHVNW FL +L +MGFG K+R+WI CI+ + +F + RGLRQ DP+S
Sbjct: 569 YDHVNWRFLMSVLEKMGFGPKWRKWIFCCISTVRMAVLVNGTPTDFFSTFRGLRQGDPLS 628
Query: 286 SFLFNVVMEALSGLMSKVNEFGVLPRGSKMPPR 384
+LF ++MEALS L+S+ E G + RG K R
Sbjct: 629 PYLFVLIMEALSSLISRAEENGFI-RGFKATGR 660
Score = 71.2 bits (173), Expect(3) = 2e-32
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Frame = +3
Query: 384 VTILQFADDAVFLVDASISHLLVVKSVLLIFKAVSGLRQT*RRLRFL------KLVRNAR 545
V+ L FADD + + L+ K V++ F+ VSGL+ ++ + ++ R A
Sbjct: 667 VSHLLFADDTLLFCEDDRDQLIFWKWVVICFEVVSGLKINLQKSEIIPIGGVEEVDRAAA 726
Query: 546 TMGREKGSLPCWYLGLPLGASYINKAVWDPVIETVRRQLREWHGTLLSKGARLILSK 716
G + G+LP YLGLPLGAS+ + VWD V E +R+L W LSKG RL L K
Sbjct: 727 VFGCKVGNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRLTLIK 783
Score = 34.3 bits (77), Expect(3) = 2e-32
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 2 FCGGCQILDD-LTTSECIDARTRSGKPSVLCKINITKAY 115
F G QILD L +E ID+R RS ++CK++I KAY
Sbjct: 531 FVEGRQILDAVLVANEAIDSRKRSVGTGLVCKLDIEKAY 569
>emb|CAN62611.1| hypothetical protein VITISV_033248 [Vitis vinifera]
Length = 954
Score = 75.9 bits (185), Expect(3) = 9e-31
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +1
Query: 115 YDHVNWEFLDYMLRRMGFGEKYRRWISLCI---TLNCPCGWFTEGYFRSERGLRQEDPIS 285
YDH+NW FL +LRRMGFGE++ WIS CI T + EG+F R LRQ DP+S
Sbjct: 723 YDHLNWNFLLSVLRRMGFGERWIGWISWCISTATFSVLINDTPEGFFNKSRXLRQGDPLS 782
Query: 286 SFLFNVVMEALSGLMSKVNEFGVL 357
+LF + MEA S L+ + G L
Sbjct: 783 PYLFVIGMEAFSRLIHRAMRGGFL 806
Score = 70.5 bits (171), Expect(3) = 9e-31
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Frame = +3
Query: 384 VTILQFADDAVFLVDASISHLLVVKSVLLIFKAVSGLRQT*RRLRFLKLVRN------AR 545
V+ L FADD + D+S + + +L+ F+A+SGLR + L + R A
Sbjct: 821 VSHLLFADDTLVFCDSSQDQMTYLSWLLMWFEALSGLRINLDKSEILPVGRVENLELLAL 880
Query: 546 TMGREKGSLPCWYLGLPLGASYINKAVWDPVIETVRRQLREWHGTLLSKGARLIL 710
+G + G LP YLG+PLGA++ + AVWD V E R++L +W +SKG R+ L
Sbjct: 881 EIGCKVGRLPTSYLGIPLGANHKSVAVWDGVEERFRKRLAKWKRQFISKGGRMTL 935
Score = 33.9 bits (76), Expect(3) = 9e-31
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 2 FCGGCQILDD-LTTSECIDARTRSGKPSVLCKINITKAY 115
F G QILD L +E ID+ +S + VLCK++I KAY
Sbjct: 685 FVEGRQILDAALIANEAIDSMLKSKENGVLCKLDIEKAY 723
>emb|CAN79792.1| hypothetical protein VITISV_021866 [Vitis vinifera]
Length = 546
Score = 79.7 bits (195), Expect(3) = 3e-30
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Frame = +1
Query: 115 YDHVNWEFLDYMLRRMGFGEKYRRWISLCI---TLNCPCGWFTEGYFRSERGLRQEDPIS 285
YDHVNW FL +++ MGFG K+ WI CI + + + G+F+S RGLRQ DP+S
Sbjct: 50 YDHVNWSFLFWLMEMMGFGAKWISWIQWCIGTVSFSVLINGTSSGFFKSSRGLRQGDPLS 109
Query: 286 SFLFNVVMEALSGLMSKVNEFG 351
+LF VMEALS L+ + E G
Sbjct: 110 LYLFVTVMEALSCLLKRAKEGG 131
Score = 65.1 bits (157), Expect(3) = 3e-30
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Frame = +3
Query: 384 VTILQFADDAVFLVDASISHLLVVKSVLLIFKAVSGLRQT*RRLRFLKL--VRNARTMGR 557
+T L FADD + + SI + + +L+ F+A+SGL+ + + + V N +
Sbjct: 141 ITHLLFADDTLVFCEPSIDQVSYLSWLLMWFEAMSGLKVNIDKSEIIAVGRVENVEEVAL 200
Query: 558 EKG----SLPCWYLGLPLGASYINKAVWDPVIETVRRQLREWHGTLLSKGARLIL 710
E G LP YLGLPLGA + A WD V E +R++L W +SKG R L
Sbjct: 201 EFGCKVSKLPSTYLGLPLGARFKEVATWDGVEERLRKRLSIWKRQYISKGGRXTL 255
Score = 33.5 bits (75), Expect(3) = 3e-30
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 2 FCGGCQILD-DLTTSECIDARTRSGKPSVLCKINITKAY 115
F G QILD L +E I + +SG +LCK++I KAY
Sbjct: 12 FVEGRQILDASLIANEAIHSMQKSGGGGILCKLDIEKAY 50
>emb|CAN66642.1| hypothetical protein VITISV_008302 [Vitis vinifera]
Length = 611
Score = 75.1 bits (183), Expect(3) = 4e-30
Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Frame = +3
Query: 354 VTEGFK---NAP*VTILQFADDAVFLVDASISHLLVVKSVLLIFKAVSGLRQT*RR---- 512
V EGF+ N V+ LQFADD +F ++ +KSVLL+F +SGL+ +
Sbjct: 164 VLEGFRVGRNRTRVSHLQFADDTIFFSSTREEBMMTLKSVLLVFGHISGLKVNLDKSNIY 223
Query: 513 ---LRFLKLVRNARTMGREKGSLPCWYLGLPLGASYINKAVWDPVIETVRRQLREWHGTL 683
L L R A + + P YLGLPLG + WDPVIE + R+L W
Sbjct: 224 GINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 283
Query: 684 LSKGARLILSKVC 722
LS G R+ L + C
Sbjct: 284 LSFGGRITLIQSC 296
Score = 73.6 bits (179), Expect(3) = 4e-30
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +1
Query: 103 YKGIYDHVNWEFLDYMLRRMGFGEKYRRWISLC---ITLNCPCGWFTEGYFRSERGLRQE 273
++ YDHV+W+FLD++L GF ++R+W+ C ++ +G+ ++ RGLRQ
Sbjct: 78 FEKAYDHVSWDFLDHVLEMKGFSLRWRKWMRGCLSSVSYAVLVNGNAKGWVKASRGLRQG 137
Query: 274 DPISSFLFNVVMEALSGLMSKVNEFGVL 357
DP+S FLFN+V + LS ++ K E VL
Sbjct: 138 DPLSPFLFNIVADVLSRMLLKAEERNVL 165
Score = 29.3 bits (64), Expect(3) = 4e-30
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 2 FCGGCQILDD-LTTSECIDARTRSGKPSVLCKINITKAY 115
F G QILD L ++ +D + R+G+ V+ KI+ KAY
Sbjct: 44 FVQGRQILDAVLIANKIVDEKRRTGEEGVVFKIDFEKAY 82
>emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
Length = 996
Score = 76.3 bits (186), Expect(3) = 6e-30
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Frame = +3
Query: 384 VTILQFADDAVFLVDASISHLLVVKSVLLIFKAVSGLRQT*RRLRFL------KLVRNAR 545
V+ L FADD + +A +L + ++ F+A SGLR + + + ++ A
Sbjct: 530 VSHLLFADDTIVFCEARKEYLAYLSWIMFWFEAASGLRINLEKSKLIPVGEVEEMEELAA 589
Query: 546 TMGREKGSLPCWYLGLPLGASYINKAVWDPVIETVRRQLREWHGTLLSKGARLILSK 716
+G + GS+P YLGLPLGA + AVWD V E +RR+L +W +SKG RLIL K
Sbjct: 590 ELGCKVGSMPSVYLGLPLGARNKSAAVWDGVEEKMRRRLAQWKRQYISKGGRLILIK 646
Score = 67.4 bits (163), Expect(3) = 6e-30
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +1
Query: 115 YDHVNWEFLDYMLRRMGFGEKYRRWISLCIT---LNCPCGWFTEGYFRSERGLRQEDPIS 285
YD +NW+FL ++R+MGFG ++ W+ CI+ + + G+F S +GLRQ DP+S
Sbjct: 432 YDSLNWQFLMKVMRKMGFGSRWLGWMWRCISTAKFSVLVNGVSAGFFPSSKGLRQGDPLS 491
Query: 286 SFLFNVVMEALSGLMSKVNEFGVL 357
+LF + ME LS L+ + E G L
Sbjct: 492 PYLFVMGMEVLSTLIRRAVEGGFL 515
Score = 33.9 bits (76), Expect(3) = 6e-30
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 2 FCGGCQILD-DLTTSECIDARTRSGKPSVLCKINITKAY 115
F G QILD L +E IDA + G+ ++CK++I KAY
Sbjct: 394 FVMGRQILDASLIANEAIDAWQKRGERGLICKLDIEKAY 432