BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035225
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    66   3e-09
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    65   7e-09
emb|CCD74524.1| F-box family protein [Arabidopsis halleri subsp....    64   1e-08
ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatul...    63   3e-08
ref|XP_002447884.1| hypothetical protein SORBIDRAFT_06g017410 [S...    62   4e-08

>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 449

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
 Frame = -3

Query: 205 MEKRTLATNMKQCKKSKTLV------------DGHDRISDLPDYLLLHILSFFKMPDVVK 62
           M+K     +    KKSKT +            +  DR+SD+PD L+ HILSF +  D ++
Sbjct: 21  MQKADSQESGPALKKSKTKILASQNVDNCEMEESQDRLSDMPDCLIHHILSFMETKDAIQ 80

Query: 61  TSLLSTRWRYLWTSISCLDF 2
           T +LS RWRYLW S+ CL F
Sbjct: 81  TCVLSKRWRYLWASVPCLSF 100


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 12/67 (17%)
 Frame = -3

Query: 166 KKSKTLV------------DGHDRISDLPDYLLLHILSFFKMPDVVKTSLLSTRWRYLWT 23
           KKSKT +            +  DR+SD+PD ++ HILSF +  D ++T +LS RWRYLW 
Sbjct: 34  KKSKTEILASQNVDNCEMEESEDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWA 93

Query: 22  SISCLDF 2
           S+ CL+F
Sbjct: 94  SVPCLNF 100


>emb|CCD74524.1| F-box family protein [Arabidopsis halleri subsp. halleri]
          Length = 550

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = -3

Query: 205 MEKRTLATNMKQCKKSKTLVDGHDRISDLPDYLLLHILSFFKMPDVVKTSLLSTRWRYLW 26
           M + +L T++ + K  KT V G D +SDLP+YLL  ILS     D V+TS+LS RWR LW
Sbjct: 121 MVRTSLNTSLHKRKFIKTKVSGKDWLSDLPEYLLCQILSKLPTKDSVRTSVLSPRWRNLW 180

Query: 25  TSISCLD 5
           + +S LD
Sbjct: 181 SHVSALD 187


>ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355521138|gb|AET01592.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 425

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 10/69 (14%)
 Frame = -3

Query: 178 MKQCKKSKTLVDGH----------DRISDLPDYLLLHILSFFKMPDVVKTSLLSTRWRYL 29
           MK+ KK+ TL+  H          DR+ D+PD L+ HILSF +  D ++T +LS RWRY+
Sbjct: 13  MKRSKKT-TLISQHVYNCVATGHQDRLGDMPDCLIHHILSFMETRDAIRTCVLSKRWRYI 71

Query: 28  WTSISCLDF 2
           W SI CL F
Sbjct: 72  WKSIPCLYF 80


>ref|XP_002447884.1| hypothetical protein SORBIDRAFT_06g017410 [Sorghum bicolor]
           gi|241939067|gb|EES12212.1| hypothetical protein
           SORBIDRAFT_06g017410 [Sorghum bicolor]
          Length = 426

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -3

Query: 136 DRISDLPDYLLLHILSFFKMPDVVKTSLLSTRWRYLWTSISCLD 5
           DR+S LPD L+ HI+SF K   VV+T +LSTRWR+LW S+ CLD
Sbjct: 24  DRLSSLPDCLIHHIMSFLKARQVVQTCVLSTRWRHLWRSVPCLD 67