BLASTX nr result
ID: Coptis24_contig00035204
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035204 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002449057.1| hypothetical protein SORBIDRAFT_05g004203 [S... 65 7e-09 dbj|BAD29050.1| ribosomal protein-like [Oryza sativa Japonica Gr... 61 8e-08 gb|ABQ08937.1| transposase [Oryza sativa Japonica Group] 61 8e-08 tpg|DAA00398.1| TPA_exp: putative transposase [Oryza sativa (jap... 61 8e-08 dbj|BAC15771.1| B [Oryza sativa Japonica Group] gi|27575890|tpg|... 61 8e-08 >ref|XP_002449057.1| hypothetical protein SORBIDRAFT_05g004203 [Sorghum bicolor] gi|241934900|gb|EES08045.1| hypothetical protein SORBIDRAFT_05g004203 [Sorghum bicolor] Length = 440 Score = 64.7 bits (156), Expect = 7e-09 Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 5/78 (6%) Frame = -3 Query: 242 CIILHNMIVEDERETDILQYIPDLEIPSREGASED-----QRHFVLSRWAFGVERVRSKV 78 CIILHNMIVEDE++ DI++ DL +P ++ ++ L+R +R K Sbjct: 361 CIILHNMIVEDEKDQDIIEENLDLNMPPSSSTVQEPEFSPEQDIPLARTLEKDTSIRDKT 420 Query: 77 VHDRLKNDLVEHLWSRRG 24 H RLKNDL+EH+W++ G Sbjct: 421 THRRLKNDLIEHIWNKFG 438 >dbj|BAD29050.1| ribosomal protein-like [Oryza sativa Japonica Group] gi|62732814|gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza sativa Japonica Group] gi|218198095|gb|EEC80522.1| hypothetical protein OsI_22800 [Oryza sativa Indica Group] Length = 447 Score = 61.2 bits (147), Expect = 8e-08 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 5/78 (6%) Frame = -3 Query: 242 CIILHNMIVEDERETDILQYIPDLEIPSREGASEDQRHFVLSRWAFG--VER---VRSKV 78 CIILHNMIVEDE+ET I++ DL +P ++ F +E+ +R + Sbjct: 362 CIILHNMIVEDEKETRIIEEDLDLNVPPSSSTVQEPEFSPEQNTPFDRVLEKDISIRDRA 421 Query: 77 VHDRLKNDLVEHLWSRRG 24 H+RLK DLVEH+W++ G Sbjct: 422 AHNRLKKDLVEHIWNKFG 439 >gb|ABQ08937.1| transposase [Oryza sativa Japonica Group] Length = 447 Score = 61.2 bits (147), Expect = 8e-08 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 6/79 (7%) Frame = -3 Query: 242 CIILHNMIVEDERETDILQYIPDLEIPSREGA------SEDQRHFVLSRWAFGVERVRSK 81 CIILHNMIVEDE+E +++ DL P+ S DQ H L R +R + Sbjct: 363 CIILHNMIVEDEKEARLIEENLDLNEPASSSTVQAPEFSPDQ-HVPLERILEKDTSMRDR 421 Query: 80 VVHDRLKNDLVEHLWSRRG 24 + H RLKNDLVEH+W++ G Sbjct: 422 LAHRRLKNDLVEHIWNKFG 440 >tpg|DAA00398.1| TPA_exp: putative transposase [Oryza sativa (japonica cultivar-group)] Length = 482 Score = 61.2 bits (147), Expect = 8e-08 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 5/78 (6%) Frame = -3 Query: 242 CIILHNMIVEDERETDILQYIPDLEIPSREGASEDQRHFVLSRWAFG--VER---VRSKV 78 CIILHNMIVEDE+ET I++ DL +P ++ F +E+ +R + Sbjct: 397 CIILHNMIVEDEKETRIIEEDLDLNVPPSSSTVQEPEFSPEQNTPFDRVLEKDISIRDRA 456 Query: 77 VHDRLKNDLVEHLWSRRG 24 H+RLK DLVEH+W++ G Sbjct: 457 AHNRLKKDLVEHIWNKFG 474 >dbj|BAC15771.1| B [Oryza sativa Japonica Group] gi|27575890|tpg|DAA00400.1| TPA_exp: putative transposase [Oryza sativa (japonica cultivar-group)] Length = 455 Score = 61.2 bits (147), Expect = 8e-08 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 6/79 (7%) Frame = -3 Query: 242 CIILHNMIVEDERETDILQYIPDLEIPSREGA------SEDQRHFVLSRWAFGVERVRSK 81 CIILHNMIVEDE+E +++ DL P+ S DQ H L R +R + Sbjct: 363 CIILHNMIVEDEKEARLIEENLDLNEPASSSTVQAPEFSPDQ-HVPLERILEKDTSMRDR 421 Query: 80 VVHDRLKNDLVEHLWSRRG 24 + H RLKNDLVEH+W++ G Sbjct: 422 LAHRRLKNDLVEHIWNKFG 440