BLASTX nr result

ID: Coptis24_contig00035197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035197
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   116   2e-24
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   114   6e-24
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   114   6e-24
gb|EAZ29014.1| hypothetical protein OsJ_13062 [Oryza sativa Japo...   111   7e-23
ref|NP_001051665.1| Os03g0810600 [Oryza sativa Japonica Group] g...   111   7e-23

>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   RIFNLCDHDKDNTLSDTEFNDLQIKCFNVPLPPSEVVDIKRVVQDKHPEGVNDRGLTLKG 182
           RIF LCDHDKD  LSD E ND Q+KCFN PL PSE+V +KRVVQ+K PEGVNDRGLTL G
Sbjct: 204 RIFILCDHDKDGALSDAELNDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDRGLTLTG 263

Query: 183 FLILTELLLQ-NKSNELWTVLRKF 251
           FL L  L ++  +    WTVLRKF
Sbjct: 264 FLFLHALFIEKGRLETTWTVLRKF 287


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/84 (65%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   RIFNLCDHDKDNTLSDTEFNDLQIKCFNVPLPPSEVVDIKRVVQDKHPEGVNDRGLTLKG 182
           RIF LCDHDKD  LSD E ND Q+KCFN PL PSE+V +KRVVQ+K PEGVND GLTL G
Sbjct: 204 RIFILCDHDKDGALSDAELNDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDHGLTLTG 263

Query: 183 FLILTELLLQ-NKSNELWTVLRKF 251
           FL L  L ++  +    WTVLRKF
Sbjct: 264 FLFLHALFIEKGRLETTWTVLRKF 287


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/84 (65%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   RIFNLCDHDKDNTLSDTEFNDLQIKCFNVPLPPSEVVDIKRVVQDKHPEGVNDRGLTLKG 182
           RIF LCDHDKD  LSD E ND Q+KCFN PL PSE+V +KRVVQ+K PEGVND GLTL G
Sbjct: 204 RIFILCDHDKDGALSDAELNDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDHGLTLTG 263

Query: 183 FLILTELLLQ-NKSNELWTVLRKF 251
           FL L  L ++  +    WTVLRKF
Sbjct: 264 FLFLHALFIEKGRLETTWTVLRKF 287


>gb|EAZ29014.1| hypothetical protein OsJ_13062 [Oryza sativa Japonica Group]
          Length = 609

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   RIFNLCDHDKDNTLSDTEFNDLQIKCFNVPLPPSEVVDIKRVVQDKHPEGVNDRGLTLKG 182
           RIF LCDHD+D  LSD E ND Q+KCFN PL P+E+  +KRVVQ+K PEGVND GLTL G
Sbjct: 202 RIFILCDHDRDGALSDVELNDFQVKCFNAPLQPTEIAGVKRVVQEKMPEGVNDNGLTLTG 261

Query: 183 FLILTELLLQ-NKSNELWTVLRKF 251
           FL L  L ++  +    WTVLRKF
Sbjct: 262 FLFLHALFIEKGRLETTWTVLRKF 285


>ref|NP_001051665.1| Os03g0810600 [Oryza sativa Japonica Group]
           gi|50540759|gb|AAT77915.1| expressed protein [Oryza
           sativa Japonica Group] gi|108711690|gb|ABF99485.1| small
           GTP-binding protein domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113550136|dbj|BAF13579.1| Os03g0810600 [Oryza sativa
           Japonica Group] gi|125546156|gb|EAY92295.1| hypothetical
           protein OsI_14016 [Oryza sativa Indica Group]
           gi|215678858|dbj|BAG95295.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 642

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   RIFNLCDHDKDNTLSDTEFNDLQIKCFNVPLPPSEVVDIKRVVQDKHPEGVNDRGLTLKG 182
           RIF LCDHD+D  LSD E ND Q+KCFN PL P+E+  +KRVVQ+K PEGVND GLTL G
Sbjct: 202 RIFILCDHDRDGALSDVELNDFQVKCFNAPLQPTEIAGVKRVVQEKMPEGVNDNGLTLTG 261

Query: 183 FLILTELLLQ-NKSNELWTVLRKF 251
           FL L  L ++  +    WTVLRKF
Sbjct: 262 FLFLHALFIEKGRLETTWTVLRKF 285


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