BLASTX nr result

ID: Coptis24_contig00035194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035194
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314331.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002268377.1| PREDICTED: guanosine-3',5'-bis(diphosphate) ...    59   5e-07

>ref|XP_002314331.1| predicted protein [Populus trichocarpa] gi|222863371|gb|EEF00502.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -2

Query: 117 IQATVKATSLEQPGGKMVVELVGVFNELSERMNMVSTSS 1
           ++AT + T+LEQ GGKMVVELVG FNEL+ERMN++STSS
Sbjct: 4   LRATAETTALEQAGGKMVVELVGAFNELTERMNVLSTSS 42


>ref|XP_002268377.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Vitis vinifera] gi|297736813|emb|CBI26014.3| unnamed
           protein product [Vitis vinifera]
          Length = 580

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/80 (46%), Positives = 48/80 (60%)
 Frame = -2

Query: 240 HVFSSLQQISKTTTLSPHTKLLYHLKKFHPSLHTNKLRFRGIQATVKATSLEQPGGKMVV 61
           H FS +    + +TL      L  L++ H S +      +   A V A +LEQPGGKMVV
Sbjct: 13  HSFSKI----RVSTLPKFPSNLIFLQR-HRSWNAFSTLRQSATAAVGAATLEQPGGKMVV 67

Query: 60  ELVGVFNELSERMNMVSTSS 1
           ELVG FNEL+ERM +VS+SS
Sbjct: 68  ELVGAFNELTERMKVVSSSS 87


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