BLASTX nr result
ID: Coptis24_contig00035190
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035190 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24067.3| unnamed protein product [Vitis vinifera] 127 1e-27 ref|XP_002266058.1| PREDICTED: microtubule-associated protein SP... 127 1e-27 ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, ... 124 8e-27 ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|2... 115 3e-24 ref|XP_004139086.1| PREDICTED: microtubule-associated protein TO... 101 5e-20 >emb|CBI24067.3| unnamed protein product [Vitis vinifera] Length = 831 Score = 127 bits (318), Expect = 1e-27 Identities = 66/115 (57%), Positives = 89/115 (77%) Frame = -3 Query: 349 ERLISQRLRERQSMDSTVTEVSPLGRQGCCSQTLNEMSSIQKQLLDIEMKQSNLMDLLQV 170 E++ ++++R+S+DSTVTE+S +GCC QT NEM SI+KQLL+IE KQS+LMDLLQV Sbjct: 476 EQIFLAKVQDRRSLDSTVTELSSQPVRGCCLQTANEMVSIRKQLLEIENKQSSLMDLLQV 535 Query: 169 FMGSTMDSLSTLQSKVLGLEHSVDRISQNLVQANNHSKVVNSKLSKGIQSVSSPR 5 F TMDSLS +QSKVLGLEH VDR++Q+LV +S + +KL + Q+V+SPR Sbjct: 536 FTTRTMDSLSMIQSKVLGLEHVVDRLAQDLVHGVKYSDLAGTKLLRKGQNVASPR 590 >ref|XP_002266058.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis vinifera] Length = 838 Score = 127 bits (318), Expect = 1e-27 Identities = 66/115 (57%), Positives = 89/115 (77%) Frame = -3 Query: 349 ERLISQRLRERQSMDSTVTEVSPLGRQGCCSQTLNEMSSIQKQLLDIEMKQSNLMDLLQV 170 E++ ++++R+S+DSTVTE+S +GCC QT NEM SI+KQLL+IE KQS+LMDLLQV Sbjct: 476 EQIFLAKVQDRRSLDSTVTELSSQPVRGCCLQTANEMVSIRKQLLEIENKQSSLMDLLQV 535 Query: 169 FMGSTMDSLSTLQSKVLGLEHSVDRISQNLVQANNHSKVVNSKLSKGIQSVSSPR 5 F TMDSLS +QSKVLGLEH VDR++Q+LV +S + +KL + Q+V+SPR Sbjct: 536 FTTRTMDSLSMIQSKVLGLEHVVDRLAQDLVHGVKYSDLAGTKLLRKGQNVASPR 590 >ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus communis] gi|223532788|gb|EEF34566.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus communis] Length = 840 Score = 124 bits (311), Expect = 8e-27 Identities = 67/115 (58%), Positives = 82/115 (71%) Frame = -3 Query: 349 ERLISQRLRERQSMDSTVTEVSPLGRQGCCSQTLNEMSSIQKQLLDIEMKQSNLMDLLQV 170 E+ S ++R+R+S+DSTVTE S GCCSQ NEM+ +QKQLL+IE KQSNLM++LQV Sbjct: 483 EQTYSAQIRDRRSLDSTVTETSFQPSHGCCSQMANEMACVQKQLLEIENKQSNLMEMLQV 542 Query: 169 FMGSTMDSLSTLQSKVLGLEHSVDRISQNLVQANNHSKVVNSKLSKGIQSVSSPR 5 F MD+LS L+SKV LEH VDRI+Q L+ HS SKL K QSVSSPR Sbjct: 543 FSSGIMDNLSILRSKVSVLEHEVDRIAQALMHGARHSDSAISKLMKQNQSVSSPR 597 >ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|222854109|gb|EEE91656.1| predicted protein [Populus trichocarpa] Length = 811 Score = 115 bits (289), Expect = 3e-24 Identities = 64/114 (56%), Positives = 80/114 (70%) Frame = -3 Query: 346 RLISQRLRERQSMDSTVTEVSPLGRQGCCSQTLNEMSSIQKQLLDIEMKQSNLMDLLQVF 167 ++ S ++R+R+S+DS VTE S GCCSQ +EM+ I+KQLL++E KQ NLM+LLQVF Sbjct: 480 QIYSAQMRDRRSIDSAVTENSFQTLHGCCSQVASEMACIRKQLLEMENKQLNLMELLQVF 539 Query: 166 MGSTMDSLSTLQSKVLGLEHSVDRISQNLVQANNHSKVVNSKLSKGIQSVSSPR 5 MD+LS LQSKV GLEH VDRI Q LVQ S S+L K Q+VSSPR Sbjct: 540 STGVMDNLSILQSKVSGLEHEVDRIGQVLVQDGRRSDSAISRLMKQNQTVSSPR 593 >ref|XP_004139086.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis sativus] gi|449476175|ref|XP_004154662.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis sativus] Length = 828 Score = 101 bits (252), Expect = 5e-20 Identities = 54/109 (49%), Positives = 77/109 (70%) Frame = -3 Query: 331 RLRERQSMDSTVTEVSPLGRQGCCSQTLNEMSSIQKQLLDIEMKQSNLMDLLQVFMGSTM 152 ++++R+S+DS VTE S Q C S+ N+M+ I+K LL+IE KQSNLMDL + F M Sbjct: 483 KVKDRRSLDSVVTESSCQVVQECDSEISNDMTCIRKHLLEIENKQSNLMDLFKEFTSGIM 542 Query: 151 DSLSTLQSKVLGLEHSVDRISQNLVQANNHSKVVNSKLSKGIQSVSSPR 5 DSLS +QS+V+GLEH V +SQ+L+ + +S + NSK K QS++SPR Sbjct: 543 DSLSAIQSRVVGLEHVVYGLSQDLLNGSRYSDLSNSKFMKQNQSLNSPR 591