BLASTX nr result

ID: Coptis24_contig00035182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035182
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22579.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...   136   2e-30
ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine...   126   2e-27
ref|XP_004166173.1| PREDICTED: uncharacterized LOC101218315 [Cuc...   124   6e-27
ref|XP_004145911.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   124   6e-27

>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
          Length = 1217

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/134 (53%), Positives = 88/134 (65%)
 Frame = +1

Query: 1   GGSCGYLRQDNLLLLEIFDYIFTGQDPELVVRASQKHTKADEDVKASVNSLKSMMXXXXX 180
           GGS  Y RQDNLLLLEIF YIF GQ+PEL+ +A    +K D D K S+N LKS++     
Sbjct: 207 GGSSKYFRQDNLLLLEIFHYIFMGQEPELLAKAHLNCSKVDGDTKTSLNGLKSIIEEEEE 266

Query: 181 XXXXXXLRNFDRHSQFSGTFTRLTMDGSKSLVKGNPGATSRDRLLKPSVVVHRGPIKRIV 360
                 +R  +R SQF G FTR+TMDGSK+  KGNP  TS D+ LKP   V RGP+K+IV
Sbjct: 267 KRKLLRIRKLNRSSQFCGAFTRVTMDGSKTFFKGNPTFTSHDKFLKPQ--VPRGPLKKIV 324

Query: 361 GDLGRLASSKDKVL 402
            D G L S+KD +L
Sbjct: 325 WDHGSLPSAKDNIL 338


>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/134 (53%), Positives = 88/134 (65%)
 Frame = +1

Query: 1   GGSCGYLRQDNLLLLEIFDYIFTGQDPELVVRASQKHTKADEDVKASVNSLKSMMXXXXX 180
           GGS  Y RQDNLLLLEIF YIF GQ+PEL+ +A    +K D D K S+N LKS++     
Sbjct: 205 GGSSKYFRQDNLLLLEIFHYIFMGQEPELLAKAHLNCSKVDGDTKTSLNGLKSIIEEEEE 264

Query: 181 XXXXXXLRNFDRHSQFSGTFTRLTMDGSKSLVKGNPGATSRDRLLKPSVVVHRGPIKRIV 360
                 +R  +R SQF G FTR+TMDGSK+  KGNP  TS D+ LKP   V RGP+K+IV
Sbjct: 265 KRKLLRIRKLNRSSQFCGAFTRVTMDGSKTFFKGNPTFTSHDKFLKPQ--VPRGPLKKIV 322

Query: 361 GDLGRLASSKDKVL 402
            D G L S+KD +L
Sbjct: 323 WDHGSLPSAKDNIL 336


>ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine max]
          Length = 1171

 Score =  126 bits (316), Expect = 2e-27
 Identities = 74/132 (56%), Positives = 88/132 (66%)
 Frame = +1

Query: 1   GGSCGYLRQDNLLLLEIFDYIFTGQDPELVVRASQKHTKADEDVKASVNSLKSMMXXXXX 180
           G S  YLRQDNLLLLEIF YI  GQDPEL+VRA  K +K DE  + S+NSL+ ++     
Sbjct: 207 GSSNVYLRQDNLLLLEIFHYILMGQDPELIVRAHLKESK-DEQPQTSLNSLQFILEEEKK 265

Query: 181 XXXXXXLRNFDRHSQFSGTFTRLTMDGSKSLVKGNPGATSRDRLLKPSVVVHRGPIKRIV 360
                 L N  RHSQFSGTF RLTMDGSK+++KGNP  +S + LLK   V  RGP KR V
Sbjct: 266 RRNICKLNNLSRHSQFSGTFARLTMDGSKAVIKGNPN-SSHNVLLKAQNVT-RGPTKRTV 323

Query: 361 GDLGRLASSKDK 396
            D  RL S++DK
Sbjct: 324 WDHPRLPSTEDK 335


>ref|XP_004166173.1| PREDICTED: uncharacterized LOC101218315 [Cucumis sativus]
          Length = 1190

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/133 (51%), Positives = 86/133 (64%)
 Frame = +1

Query: 4   GSCGYLRQDNLLLLEIFDYIFTGQDPELVVRASQKHTKADEDVKASVNSLKSMMXXXXXX 183
           GSC +LRQD L+ LEIF YIF GQ+PEL+ +  Q  ++ + +  +SVNSLKSMM      
Sbjct: 208 GSCSHLRQDKLVFLEIFYYIFMGQEPELIAKVPQNSSEENVETVSSVNSLKSMM--EEDR 265

Query: 184 XXXXXLRNFDRHSQFSGTFTRLTMDGSKSLVKGNPGATSRDRLLKPSVVVHRGPIKRIVG 363
                L+N +RHSQFSGTFTR T+DGSK ++KG P  +S      P V   RGPIK+I  
Sbjct: 266 RKFSRLQNLNRHSQFSGTFTRQTLDGSKLVLKGKPSLSSSTSHKPPKVC--RGPIKKIAW 323

Query: 364 DLGRLASSKDKVL 402
           DLGRL S   K+L
Sbjct: 324 DLGRLTSKNSKLL 336


>ref|XP_004145911.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101218315 [Cucumis sativus]
          Length = 1197

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/133 (51%), Positives = 86/133 (64%)
 Frame = +1

Query: 4   GSCGYLRQDNLLLLEIFDYIFTGQDPELVVRASQKHTKADEDVKASVNSLKSMMXXXXXX 183
           GSC +LRQD L+ LEIF YIF GQ+PEL+ +  Q  ++ + +  +SVNSLKSMM      
Sbjct: 215 GSCSHLRQDKLVFLEIFYYIFMGQEPELIAKVPQNSSEENVETVSSVNSLKSMM--EEDR 272

Query: 184 XXXXXLRNFDRHSQFSGTFTRLTMDGSKSLVKGNPGATSRDRLLKPSVVVHRGPIKRIVG 363
                L+N +RHSQFSGTFTR T+DGSK ++KG P  +S      P V   RGPIK+I  
Sbjct: 273 RKFSRLQNLNRHSQFSGTFTRQTLDGSKLVLKGKPSLSSSTSHKPPKVC--RGPIKKIAW 330

Query: 364 DLGRLASSKDKVL 402
           DLGRL S   K+L
Sbjct: 331 DLGRLTSKNSKLL 343


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