BLASTX nr result

ID: Coptis24_contig00035165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035165
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...    79   4e-13
gb|ABR16110.1| unknown [Picea sitchensis]                              70   2e-10
emb|CBI32505.3| unnamed protein product [Vitis vinifera]               69   3e-10

>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/80 (57%), Positives = 57/80 (71%)
 Frame = -2

Query: 255 CFVLTIFLCQESSTKKGLLYVIASVSLFDEYTNDFLYLREGSCFPRPTFKDTLDDDDSQL 76
           CF   +   QE+STK+GLLYVIAS S+FDEYTND LYL+EGSCFPRP ++       S L
Sbjct: 266 CFAAVVAY-QENSTKRGLLYVIASASIFDEYTNDLLYLQEGSCFPRPRYRKGA-TSSSSL 323

Query: 75  LPRKGLHEQLEALHAKQILM 16
           LP KGLHE+ EA +  + L+
Sbjct: 324 LPVKGLHERFEAAYVGEQLV 343


>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/76 (51%), Positives = 55/76 (72%)
 Frame = -2

Query: 228 QESSTKKGLLYVIASVSLFDEYTNDFLYLREGSCFPRPTFKDTLDDDDSQLLPRKGLHEQ 49
           QE+STK+GLLYV+AS S+FDEYTND LYL++GSCFPRP ++  +    S LLP   L EQ
Sbjct: 275 QENSTKRGLLYVVASASVFDEYTNDLLYLQQGSCFPRPKYRKQV-SSTSSLLPVMRLQEQ 333

Query: 48  LEALHAKQILMAGPSE 1
           L++ +  +  +  P++
Sbjct: 334 LDSAYVGEPFIRPPTD 349


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/76 (57%), Positives = 54/76 (71%)
 Frame = -2

Query: 228 QESSTKKGLLYVIASVSLFDEYTNDFLYLREGSCFPRPTFKDTLDDDDSQLLPRKGLHEQ 49
           QESS K+GLLY++AS+SLFDE TNDFLYLREGSCFPRP +   L    + L+   GL+EQ
Sbjct: 275 QESSIKRGLLYIVASMSLFDESTNDFLYLREGSCFPRPRYCKQLTYSPT-LVSVNGLNEQ 333

Query: 48  LEALHAKQILMAGPSE 1
              LHA + L+   SE
Sbjct: 334 ---LHANEPLVRTASE 346


>gb|ABR16110.1| unknown [Picea sitchensis]
          Length = 605

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -2

Query: 252 FVLTIFLCQESSTKKGLLYVIASVSLFDEYTNDFLYLREGSCFPRPTFKDTLDDDDSQLL 73
           F   + + QESS K GL YV+++++LFDEY NDFLY+REGSCFPRP ++       SQ +
Sbjct: 266 FYAAVVVYQESSIKLGLAYVVSALALFDEYANDFLYMREGSCFPRPKYR-------SQNM 318

Query: 72  PRKG 61
           P  G
Sbjct: 319 PLSG 322


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -2

Query: 228 QESSTKKGLLYVIASVSLFDEYTNDFLYLREGSCFPR 118
           QESS K+GLLY++AS+SLFDE TNDFLYLREGSCFPR
Sbjct: 275 QESSIKRGLLYIVASMSLFDESTNDFLYLREGSCFPR 311


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