BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035160
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ74673.1| putative F-box family protein [Phaseolus vulgaris]      80   2e-13
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    77   1e-12
gb|AFK40721.1| unknown [Lotus japonicus]                               75   4e-12
ref|XP_003532284.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g...    75   4e-12

>gb|ACZ74673.1| putative F-box family protein [Phaseolus vulgaris]
          Length = 350

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
 Frame = +3

Query: 9   PDPILHHILSFLEMRYVLQTCILSKRWNSLWTTLSFLTFERH--TYGKTLPLKTEDEFMD 182
           PD IL +ILSFL  + V+ T +LSKRWN LW ++    +E H  T      L    +F+ 
Sbjct: 9   PDSILCYILSFLPTKQVVATSVLSKRWNLLWRSVPSFDYEHHDPTGDYEDDLDACSDFLY 68

Query: 183 YVHKVLLTRDMFTCIHTLRLS----YFHVGDDAWLDIVVRRN--IQELDLFIEFGYMEFE 344
            +   LL RDM   +H LRL+    Y H   + W++  +RR+  ++ LDL +   Y +F 
Sbjct: 69  SMFSHLLLRDMDKPLHRLRLTCCSGYNHYSIEIWIEAALRRSSRLEHLDLNV---YKDFV 125

Query: 345 LPYSLVNCKTLVVL 386
           +P  + +CKTLVVL
Sbjct: 126 VPSVVFSCKTLVVL 139


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
 Frame = +3

Query: 6   LPDPILHHILSFLEMRYVLQTCILSKRWNSLWTTLSFLTFERH-TYGKTLPLKTEDE--- 173
           LPD +L HI+SFL  ++ + T +LSKRW  LW ++  L F+      +  P+   +    
Sbjct: 15  LPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSIC 74

Query: 174 FMDYVHKVLLTRDMFTCIHTLRLSYF-HVGDDA---WLDIVVRRNIQELDLFIEFGYMEF 341
           F ++V KVLL     +CI   RL    H  D A   W+   + RN+QELDL+ +  Y   
Sbjct: 75  FKNFVDKVLL-HGSISCIRKFRLKCSDHELDSAVNSWICTALERNVQELDLYFDTEY-PI 132

Query: 342 ELPYSLVNCKTLVVL 386
           ELP     CKTLVVL
Sbjct: 133 ELPPKFFFCKTLVVL 147


>ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355492442|gb|AES73645.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 470

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 17/145 (11%)
 Frame = +3

Query: 3   TLPDPILHHILSFLEMRYVLQTCILSKRWNSLWTTL------SFLTFERHTYGKTLPLKT 164
           +LPD  L HILSFL  + V+ T +LSKRW   W ++      + +  E   Y + + L T
Sbjct: 82  SLPDADLSHILSFLPTKQVVATSVLSKRWKHQWRSVFDINLTNSICKEYGEYCEEITLNT 141

Query: 165 E---DEFMDYVHKVLLTRDMFTCIHTLRLSY--FHVGDDA------WLDIVVRRNIQELD 311
           +   D F ++V+ +LL  D     H L++ Y    +G         W+D VV   ++ L 
Sbjct: 142 QYALDSFNEFVYSILLKLDSIKSFH-LKVGYGSSSLGSRGFPSVVKWVDHVVHHGVESLR 200

Query: 312 LFIEFGYMEFELPYSLVNCKTLVVL 386
           LF  F Y + +LP S++NCKTLVVL
Sbjct: 201 LF-PFTYSDMKLPVSILNCKTLVVL 224


>gb|AFK40721.1| unknown [Lotus japonicus]
          Length = 394

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
 Frame = +3

Query: 3   TLPDPILHHILSFLEMRYVLQTCILSKRWNSLWTTLSFLTF-ERHTYGKTLPLKTEDEFM 179
           +LPDPIL HILS L  +  + T ILSKRW  LW ++  L F + + YG     +    F+
Sbjct: 12  SLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGD---EVYARFV 68

Query: 180 DYVHKVLLTRDMFTCIHTLRLSYFHVGDD-----AWLDIVVRRNIQELDLFIEFGYMEF- 341
           + V+KV+L RD    I   RL       D      W+++V++R ++ +D+ + F   EF 
Sbjct: 69  EAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEFL 128

Query: 342 ELPY------SLVNCKTLVVL 386
           ELP+      S+ +C TLVVL
Sbjct: 129 ELPHIVVDTPSMFSCTTLVVL 149


>ref|XP_003532284.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine
           max]
          Length = 380

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
 Frame = +3

Query: 6   LPDPILHHILSFLEMRYVLQTCILSKRWNSLWTTLSFLTFERHTYGKTLPLKTEDEFMDY 185
           LPD +L HILSFL  +  + T ILSKRW +LW ++  L FE         ++T   F+  
Sbjct: 8   LPDAVLCHILSFLPTKQSIVTSILSKRWKALWRSVPALHFEESLMDNNNDIETHARFVQS 67

Query: 186 VHKVLLTRDM---FTCIHTLRLSYF--HVGDDAWLDIVVRRNIQELDLFIEFGYMEFELP 350
           V+   L+RDM   F   H +  S+    V   AW+   ++R ++ L L +     +  LP
Sbjct: 68  VYAFTLSRDMDQPFRRFHLVSRSFLCNPVNVIAWVSAALQRRVENLCLSLT-PLTKMVLP 126

Query: 351 YSLVNCKTLVVL 386
            +L +CKTLVVL
Sbjct: 127 SALFSCKTLVVL 138