BLASTX nr result

ID: Coptis24_contig00035154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035154
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531875.1| PREDICTED: uncharacterized protein LOC100527...   116   2e-24
ref|XP_002531002.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
ref|XP_003552604.1| PREDICTED: uncharacterized protein LOC100785...   114   6e-24
gb|AFK43764.1| unknown [Medicago truncatula]                          109   3e-22
ref|XP_002330916.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22

>ref|XP_003531875.1| PREDICTED: uncharacterized protein LOC100527287 [Glycine max]
           gi|255631956|gb|ACU16358.1| unknown [Glycine max]
          Length = 86

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/71 (78%), Positives = 61/71 (85%)
 Frame = +3

Query: 3   MTFVIGMCGFQLTRNMLLNPDVRINKAHRTSAVLDNKEEGEKYAEHGLRKFLRQRPKEIM 182
           MTFV GMC FQLTRN+L NPDVRINK  R+ AVL+N+EEGEKYAEHGLRKFLR RP EIM
Sbjct: 16  MTFVTGMCVFQLTRNVLGNPDVRINKTRRSMAVLENREEGEKYAEHGLRKFLRTRPPEIM 75

Query: 183 PTINQFFSGEK 215
           PTIN FFS +K
Sbjct: 76  PTINHFFSEDK 86


>ref|XP_002531002.1| conserved hypothetical protein [Ricinus communis]
           gi|223529429|gb|EEF31390.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/71 (76%), Positives = 61/71 (85%)
 Frame = +3

Query: 3   MTFVIGMCGFQLTRNMLLNPDVRINKAHRTSAVLDNKEEGEKYAEHGLRKFLRQRPKEIM 182
           MTFV  +C FQLTRNM LNPDVRINKAHR +AVL+N+ EGE+YAEHGLRKFLR RP EIM
Sbjct: 16  MTFVTSLCAFQLTRNMFLNPDVRINKAHRRTAVLENEVEGEQYAEHGLRKFLRTRPPEIM 75

Query: 183 PTINQFFSGEK 215
           P+IN FFS +K
Sbjct: 76  PSINHFFSEDK 86


>ref|XP_003552604.1| PREDICTED: uncharacterized protein LOC100785946 [Glycine max]
          Length = 86

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/71 (78%), Positives = 59/71 (83%)
 Frame = +3

Query: 3   MTFVIGMCGFQLTRNMLLNPDVRINKAHRTSAVLDNKEEGEKYAEHGLRKFLRQRPKEIM 182
           MTFV  MC FQLTRNML NPDVRINK  R+  VLDN+EEGEKYAEHGLRKFLR RP EIM
Sbjct: 16  MTFVSSMCVFQLTRNMLGNPDVRINKTRRSMPVLDNREEGEKYAEHGLRKFLRTRPPEIM 75

Query: 183 PTINQFFSGEK 215
           PTIN FFS +K
Sbjct: 76  PTINHFFSEDK 86


>gb|AFK43764.1| unknown [Medicago truncatula]
          Length = 86

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/71 (73%), Positives = 57/71 (80%)
 Frame = +3

Query: 3   MTFVIGMCGFQLTRNMLLNPDVRINKAHRTSAVLDNKEEGEKYAEHGLRKFLRQRPKEIM 182
           MTFV  MC FQLTRN+L NPDVRI+K  RT  V DNKEEGEKYA+HGLR FLR RP E+M
Sbjct: 16  MTFVTSMCVFQLTRNLLQNPDVRISKNGRTKGVFDNKEEGEKYAKHGLRNFLRTRPPEVM 75

Query: 183 PTINQFFSGEK 215
           PTIN FFS +K
Sbjct: 76  PTINHFFSEQK 86


>ref|XP_002330916.1| predicted protein [Populus trichocarpa] gi|222873110|gb|EEF10241.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +3

Query: 3   MTFVIGMCGFQLTRNMLLNPDVRINKAHRTSAVLDNKEEGEKYAEHGLRKFLRQRPKEIM 182
           MT V  +C FQLTRN+ +NPDVR+NKA+R   VL+NKEEGE+YAEHGLRKFLR RP EIM
Sbjct: 16  MTCVTSLCIFQLTRNVFMNPDVRVNKANRGMGVLENKEEGERYAEHGLRKFLRTRPPEIM 75

Query: 183 PTINQFFSGEK 215
           PT+N FFS +K
Sbjct: 76  PTVNHFFSEDK 86


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