BLASTX nr result

ID: Coptis24_contig00035150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035150
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317457.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_003541818.1| PREDICTED: uncharacterized protein LOC100794...   123   2e-26
ref|XP_003543209.1| PREDICTED: uncharacterized protein LOC100802...   121   5e-26
ref|XP_003539619.1| PREDICTED: uncharacterized protein LOC100780...   121   5e-26
emb|CBI20187.3| unnamed protein product [Vitis vinifera]              121   5e-26

>ref|XP_002317457.1| predicted protein [Populus trichocarpa] gi|222860522|gb|EEE98069.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/100 (54%), Positives = 74/100 (74%)
 Frame = +2

Query: 2   FFLRVFKEDNELMDYYERKYESGEFCCLVCGGSGEKVWKRFKNCVALVQHSVAIAKTRRK 181
           FFLR+F + NEL +YYE  YE GEFCCLVC    +K WK+FK C+ L+QH+ AI++T++K
Sbjct: 420 FFLRLFTDSNELRNYYENHYEGGEFCCLVCCALKKKGWKKFKGCLGLLQHTTAISRTKKK 479

Query: 182 SAHRAFGNAVCKVLGWNINRLPGIVLSMDEPLRKNLGKEG 301
            AHRA+   +CKVLGW++++LP IVL   EPL  ++ K G
Sbjct: 480 KAHRAYAQVICKVLGWDVDQLPRIVLK-GEPLGHSMAKSG 518



 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/100 (53%), Positives = 71/100 (71%)
 Frame = +2

Query: 2   FFLRVFKEDNELMDYYERKYESGEFCCLVCGGSGEKVWKRFKNCVALVQHSVAIAKTRRK 181
           F L +F E+ E+ D+YE+  E+G+F CL+CGG GEKV K ++ C  LVQH+  I+KT+RK
Sbjct: 188 FLLSLFVENQEIRDFYEKNNENGDFYCLICGGIGEKVGKVYRGCTGLVQHARTISKTKRK 247

Query: 182 SAHRAFGNAVCKVLGWNINRLPGIVLSMDEPLRKNLGKEG 301
            AHRAF + +CKVLGW+I+RLP IVL   EPL +     G
Sbjct: 248 GAHRAFSHLICKVLGWDISRLPMIVLK-GEPLSRTFANSG 286


>ref|XP_003541818.1| PREDICTED: uncharacterized protein LOC100794306 [Glycine max]
          Length = 238

 Score =  123 bits (308), Expect = 2e-26
 Identities = 51/86 (59%), Positives = 68/86 (79%)
 Frame = +2

Query: 2   FFLRVFKEDNELMDYYERKYESGEFCCLVCGGSGEKVWKRFKNCVALVQHSVAIAKTRRK 181
           FF +VF ED +L  YYE  ++ G+F CLVCGG G+KVWKRFK+C+ L+QHS AI +TRRK
Sbjct: 114 FFEKVFAEDGDLRRYYENNHKEGDFYCLVCGGIGKKVWKRFKDCIGLIQHSTAILRTRRK 173

Query: 182 SAHRAFGNAVCKVLGWNINRLPGIVL 259
            AHRA+   +CKV+GW+I+++P IVL
Sbjct: 174 RAHRAYAQVICKVVGWDIDQMPAIVL 199


>ref|XP_003543209.1| PREDICTED: uncharacterized protein LOC100802966 [Glycine max]
          Length = 273

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/103 (56%), Positives = 74/103 (71%), Gaps = 4/103 (3%)
 Frame = +2

Query: 2   FFLRVFKEDNELMDYYERKYESGEFCCLVCGGSGEKVWKRFKNCVALVQHSVAIAKTRRK 181
           FF +VF ED +L  YYE  ++ G+F CLVCGG G+KVWKRFKNC  L+ HS AI +T+RK
Sbjct: 136 FFEKVFAEDGDLRRYYESNHKEGDFHCLVCGGIGKKVWKRFKNCKTLIHHSTAILRTKRK 195

Query: 182 SAHRAFGNAVCKVLGWNINRLPGIVL-SMDEPL---RKNLGKE 298
            AHRA+   +CKV+GW+I++LP IVL  +D  L   RK LG E
Sbjct: 196 RAHRAYAQVICKVVGWDIDQLPAIVLKDLDSSLTGSRKLLGCE 238


>ref|XP_003539619.1| PREDICTED: uncharacterized protein LOC100780103 [Glycine max]
          Length = 351

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 4/103 (3%)
 Frame = +2

Query: 2   FFLRVFKEDNELMDYYERKYESGEFCCLVCGGSGEKVWKRFKNCVALVQHSVAIAKTRRK 181
           FF +VF ED +L  YYE  ++ G+F CLVCGG G+KVWKRFKNC  L+ HS AI +T+RK
Sbjct: 136 FFEKVFAEDGDLRRYYESNHKEGDFYCLVCGGIGKKVWKRFKNCKTLIHHSTAILRTKRK 195

Query: 182 SAHRAFGNAVCKVLGWNINRLPGIVL-SMDEPL---RKNLGKE 298
            AHRA+   +CKV GW+I++LP IVL  +D  L   RK LG E
Sbjct: 196 RAHRAYAQVICKVFGWDIDQLPAIVLKDLDSSLACSRKLLGFE 238


>emb|CBI20187.3| unnamed protein product [Vitis vinifera]
          Length = 406

 Score =  121 bits (304), Expect = 5e-26
 Identities = 53/92 (57%), Positives = 70/92 (76%)
 Frame = +2

Query: 2   FFLRVFKEDNELMDYYERKYESGEFCCLVCGGSGEKVWKRFKNCVALVQHSVAIAKTRRK 181
           FF+ +F +D EL  YYE+  E G FCCLVCGG G+KV KR+K+CV LVQHS AI+KT +K
Sbjct: 183 FFVGLFSKDVELRSYYEKNNEGGIFCCLVCGGMGKKVGKRYKDCVGLVQHSSAISKTNKK 242

Query: 182 SAHRAFGNAVCKVLGWNINRLPGIVLSMDEPL 277
            AHR++G+ +C+VLGW++NRLP I L   + L
Sbjct: 243 RAHRSYGHVICRVLGWDVNRLPTIALKAGDHL 274


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